Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HIGD1AP1-201ENST00000550979 275 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 MIR3609-201ENST00000582661 80 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 MIR4795-201ENST00000584182 89 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC012493.2-201ENST00000595083 291 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC006557.5-201ENST00000603126 811 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC007938.3-201ENST00000604965 623 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC002044.1-201ENST00000606707 158 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC012531.5-201ENST00000611375 151 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 FAM157A-202ENST00000615155 405 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC002076.2-201ENST00000617362 122 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
VTA1Q9NP79 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VTA1Q9NP79 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
VTA1Q9NP79 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VTA1Q9NP79 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
VTA1Q9NP79 FTLP6-201ENST00000355274 422 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 RNA5SP295-201ENST00000362655 121 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 RNA5SP42-201ENST00000364278 115 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 Y_RNA.339-201ENST00000365325 102 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 RN7SKP158-201ENST00000410453 326 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 HMGB1P9-201ENST00000429856 646 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 AL645568.3-201ENST00000433683 316 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 AL078601.1-201ENST00000444542 271 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 MTND1P17-201ENST00000448961 204 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 HMGN2P7-201ENST00000456186 273 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 AL136097.1-201ENST00000456945 913 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 RNA5SP310-201ENST00000459084 116 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 RPL9P32-201ENST00000464118 620 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 AC117503.1-201ENST00000472241 394 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 RPL7P43-201ENST00000478876 753 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 AC008526.1-201ENST00000509149 338 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 TBCAP3-201ENST00000512475 312 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 Y_RNA.682-201ENST00000516457 100 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 RNU6-1231P-201ENST00000517185 103 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 NACAP3-201ENST00000552100 481 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 AL355375.2-201ENST00000574825 175 ntBASIC3.9□□□□□ -1.79
VTA1Q9NP79 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VTA1Q9NP79 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.9□□□□□ -1.79
VTA1Q9NP79 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
VTA1Q9NP79 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 Z83843.1-201ENST00000604070 3685 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 ZNF519P1-201ENST00000449011 1626 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 RNU6-694P-201ENST00000364071 147 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AC096664.2-201ENST00000411843 406 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 NDUFS5P4-201ENST00000412983 318 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AL096701.2-201ENST00000416920 238 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 HMGN2P30-201ENST00000423237 256 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 RPL37P4-201ENST00000448908 268 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 HMGB3P8-201ENST00000449709 577 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 AC092001.1-201ENST00000453012 261 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 RNU6-1088P-201ENST00000516850 104 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 SNORA31.19-201ENST00000517079 126 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AC026371.1-201ENST00000551867 419 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 MIR4790-201ENST00000577799 79 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 AC138761.3-201ENST00000579993 334 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AC090574.1-201ENST00000623186 233 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 AL133216.2-202ENST00000634512 349 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VTA1Q9NP79 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VTA1Q9NP79 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.89□□□□□ -1.79
VTA1Q9NP79 SRP72P2-201ENST00000344851 1979 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 MTND5P7-201ENST00000413558 1798 ntBASIC3.89□□□□□ -1.79
VTA1Q9NP79 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.88□□□□□ -1.79
VTA1Q9NP79 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VTA1Q9NP79 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VTA1Q9NP79 RNU6-1252P-201ENST00000363054 104 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 SNORD14B-201ENST00000364533 90 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 RNU6-1106P-201ENST00000390845 107 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 RNU6-293P-201ENST00000411259 106 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 RPL37P10-201ENST00000412884 288 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 AC006989.1-201ENST00000427212 131 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 RPS29P31-201ENST00000446147 164 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.88□□□□□ -1.79
VTA1Q9NP79 AC087884.1-201ENST00000469738 328 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 MTND5P5-201ENST00000503764 376 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 BTF3L4P4-201ENST00000506381 449 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms