Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RPS15AP34-201ENST00000487776 387 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL160314.1-201ENST00000490836 438 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 MTCO3P9-201ENST00000506989 781 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RNA5SP341-201ENST00000516261 117 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RNA5SP291-201ENST00000517222 105 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AC118273.2-201ENST00000532092 465 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 BNIP3P6-201ENST00000549284 499 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AC106782.4-201ENST00000568264 210 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL161756.2-201ENST00000604597 246 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL161798.1-201ENST00000604630 131 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL162274.2-201ENST00000614406 332 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 U6.42-201ENST00000618440 107 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 DUXAP9-208ENST00000622815 614 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 MTND1P37-201ENST00000636562 264 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 HSPA8P4-201ENST00000511877 1920 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 RNU1-35P-201ENST00000362782 153 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 Y_RNA.373-201ENST00000365600 103 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 SNORA32.2-201ENST00000384049 122 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 MIR491-201ENST00000384877 84 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 RNU6-193P-201ENST00000410977 107 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AC080125.1-201ENST00000414888 684 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 GPM6BP2-201ENST00000432046 144 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 NDUFB4P6-201ENST00000436819 366 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 MTCO3P18-201ENST00000440206 761 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 GPM6BP1-201ENST00000446387 144 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 MTND3P10-201ENST00000450967 341 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 SCARNA18-201ENST00000459004 134 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 TRBV1-201ENST00000476502 284 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 RPL38P4-201ENST00000502376 214 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AC114786.4-201ENST00000508771 728 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AC098799.2-201ENST00000509466 868 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 RNU6-56P-201ENST00000516986 93 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 CENPUP1-201ENST00000526649 1202 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AL137161.1-201ENST00000532231 390 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 H3F3AP1-201ENST00000559984 334 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 MIR4325-201ENST00000583049 90 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 AL355073.2-201ENST00000612106 557 ntBASIC3.01□□□□□ -1.93
PCDH9Q9HC56 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
PCDH9Q9HC56 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDH9Q9HC56 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDH9Q9HC56 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3□□□□□ -1.93
PCDH9Q9HC56 AC007785.2-201ENST00000598627 1916 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 Y_RNA.231-201ENST00000364358 102 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 RNU6-741P-201ENST00000383889 107 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 SNORD70.1-201ENST00000391007 85 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3□□□□□ -1.93
PCDH9Q9HC56 ATG3P1-201ENST00000419507 911 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 AC093151.1-201ENST00000427711 313 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3□□□□□ -1.93
PCDH9Q9HC56 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3□□□□□ -1.93
PCDH9Q9HC56 ERLEC1P1-201ENST00000433806 578 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 CECR9-201ENST00000453421 199 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 AC008628.2-201ENST00000502605 298 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 CASP1P1-201ENST00000526345 212 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 ATP5F1P5-201ENST00000526403 760 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3□□□□□ -1.93
PCDH9Q9HC56 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3□□□□□ -1.93
PCDH9Q9HC56 RNU6-89P-201ENST00000606519 100 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 AC107294.1-201ENST00000609524 467 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 DUSP12P1-201ENST00000612874 516 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 AC006504.8-201ENST00000621046 635 ntBASIC3□□□□□ -1.93
PCDH9Q9HC56 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3□□□□□ -1.93
PCDH9Q9HC56 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC000403.1-201ENST00000613696 3585 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RNU5E-4P-201ENST00000364931 120 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 SNORA9.2-201ENST00000365361 133 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 Y_RNA.378-201ENST00000365652 113 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RNU6-1027P-201ENST00000383998 107 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 SNORA9-201ENST00000384215 133 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AL590004.2-201ENST00000404787 371 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms