Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL360181.4-201ENST00000621752 134 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 MIR6715B-201ENST00000637172 77 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 Z75746.1-201ENST00000440243 2080 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 ZNF962P-201ENST00000443465 3140 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 RNU1-35P-201ENST00000362782 153 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.84-201ENST00000363011 104 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.416-201ENST00000384014 113 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-629P-201ENST00000384061 103 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-611P-201ENST00000384276 104 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 MIR548M-201ENST00000408260 86 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 MTCO3P29-201ENST00000432119 779 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 PRELID3BP1-201ENST00000457142 540 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 U8.21-201ENST00000459536 136 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 RPL23AP45-201ENST00000476406 468 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 MLLT10P2-201ENST00000506434 249 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AC108043.1-201ENST00000512696 574 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 RN7SKP40-201ENST00000517211 242 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 RNU4-60P-201ENST00000517239 135 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AP003730.1-201ENST00000524605 285 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 PARP1P2-201ENST00000556806 195 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AP001282.2-201ENST00000616149 309 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 AC006065.5-201ENST00000623427 349 ntBASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.69□□□□□ -1.82
SEC61A2Q9H9S3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 LINC02471-203ENST00000641941 4752 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.54-201ENST00000362766 105 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 RNU1-76P-201ENST00000362903 159 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.237-201ENST00000364439 102 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 RNA5SP235-201ENST00000365411 114 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.462-201ENST00000384268 102 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.539-201ENST00000384635 107 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-1203P-201ENST00000410703 110 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 COX6B1P7-201ENST00000430845 235 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 NUTF2P7-201ENST00000453086 375 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 RNU7-87P-201ENST00000459343 62 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AK3P2-201ENST00000507976 429 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-911P-201ENST00000516523 104 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AC084851.1-201ENST00000529105 249 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AL137100.2-201ENST00000555786 315 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AC025884.1-201ENST00000556034 378 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AC022655.2-201ENST00000577280 318 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 MIR8076-201ENST00000611401 83 ntBASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SEC61A2Q9H9S3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 MIR412-201ENST00000362142 91 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.20-201ENST00000362479 113 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.65-201ENST00000362846 100 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 SNORD50.1-201ENST00000362987 71 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 U3.6-201ENST00000363622 211 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-173P-201ENST00000364215 104 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.458-201ENST00000384240 102 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.518-201ENST00000384552 113 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 MIR10A-201ENST00000385043 110 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 CYP4F29P-201ENST00000420685 446 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 MYL8P-204ENST00000431574 518 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms