Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 MTND6P13-201ENST00000443510 523 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 MTND2P22-201ENST00000444325 1033 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 SSXP1-201ENST00000453640 473 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AL139109.1-201ENST00000455491 297 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 RPL31P3-201ENST00000458430 332 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 SNORD42A-201ENST00000459584 64 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AL160314.1-201ENST00000490836 438 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 SCARNA11.3-201ENST00000517276 130 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 PIGPP4-201ENST00000584447 307 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC005771.1-201ENST00000585581 349 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 NRBF2P1-201ENST00000587407 859 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 HMGN1P30-201ENST00000589286 268 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC103710.2-201ENST00000609912 942 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 FTX_3.1-201ENST00000610451 147 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 PISRT1-201ENST00000626175 531 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 MTND4P35-201ENST00000604257 1375 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 RNU6-511P-201ENST00000363496 107 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 SNORA40.3-201ENST00000390964 122 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 MRPL42P2-201ENST00000403169 426 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 RPS3AP3-201ENST00000411933 242 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC096649.2-201ENST00000416186 393 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AL589872.1-201ENST00000426602 288 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC007919.1-201ENST00000429380 217 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 HMGB1P9-201ENST00000429856 646 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 DPPA3P1-201ENST00000448050 469 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 RPL26P9-201ENST00000457466 433 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 snoU109.1-201ENST00000459339 135 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 MTCO2P29-201ENST00000465212 189 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 RPL21P99-201ENST00000480369 423 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC026801.1-201ENST00000497178 464 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC117532.1-201ENST00000514638 323 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 RNU6-927P-201ENST00000516199 100 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 RNU6-390P-201ENST00000516259 103 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 Y_RNA.672-201ENST00000516289 104 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 Y_RNA.695-201ENST00000516715 107 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 RN7SKP258-201ENST00000517151 304 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 PRELID2P1-201ENST00000552837 301 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC023824.2-201ENST00000566185 400 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AP005136.1-201ENST00000579765 429 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AL451064.1-201ENST00000607718 471 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC097065.2-201ENST00000608159 533 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC004908.3-201ENST00000610248 625 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC091304.9-201ENST00000612091 226 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 AC245884.12-201ENST00000615364 59 ntBASIC2.22□□□□□ -2.05
NXF3Q9H4D5 SNORA38-201ENST00000363946 132 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 RN7SKP142-201ENST00000411236 328 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 MTATP6P30-201ENST00000443540 664 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AL033528.1-201ENST00000453780 140 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 MRPS17P3-201ENST00000465453 385 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 SUMO2P6-201ENST00000505273 288 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC091965.2-201ENST00000512324 613 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 MTND5P13-201ENST00000513046 1079 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC022447.1-201ENST00000515358 464 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 IGLV3-17-201ENST00000519099 244 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 RPS3AP4-201ENST00000555161 764 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC009127.3-201ENST00000570531 403 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 RPS15AP11-201ENST00000594193 385 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC073544.2-201ENST00000601155 540 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AP000860.1-201ENST00000605250 559 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms