Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 RPL31P60-201ENST00000478450 367 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 HMGB1P35-201ENST00000503360 598 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 SNORA70.16-201ENST00000516390 95 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 IGKV2D-19-201ENST00000523346 262 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC107016.1-201ENST00000550463 337 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC090517.1-201ENST00000569307 266 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 MIR3158-1-201ENST00000583596 81 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 MIR3976-201ENST00000606807 139 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC006133.1-201ENST00000617106 264 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 FP236240.3-201ENST00000623061 327 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC048347.1-201ENST00000624621 427 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 PRO1804-201ENST00000623780 2050 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.14-201ENST00000362415 103 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 SNORA20.1-201ENST00000364790 130 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 MIR30B-201ENST00000384850 88 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 HSPE1P26-201ENST00000405341 275 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 RNU6-174P-201ENST00000410406 106 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 RNU6-325P-201ENST00000411132 105 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 RNU2-64P-201ENST00000411315 191 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 RPS15AP6-201ENST00000420703 385 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AL445584.1-201ENST00000431451 330 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 RPS4XP13-201ENST00000483219 789 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 HMGB3P17-201ENST00000504195 649 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC113155.1-201ENST00000511141 769 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 ACA59.1-201ENST00000515966 143 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 SNORA31.3-201ENST00000516029 96 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 SNORA40.15-201ENST00000516884 107 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 RNU6-570P-201ENST00000517051 105 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC022968.1-201ENST00000567372 442 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 MIR4429-201ENST00000580105 73 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 MIR548AC-201ENST00000585049 88 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC020914.4-201ENST00000597690 277 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC004825.2-201ENST00000616634 455 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 AC141273.2-201ENST00000618989 130 ntBASIC4.14□□□□□ -1.75
RNF38Q9H0F5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF38Q9H0F5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 OR56A5-201ENST00000340110 738 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.19-201ENST00000362462 99 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 AL359837.1-201ENST00000381357 287 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.515-201ENST00000384535 112 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 AC063979.1-201ENST00000415539 377 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 AL356867.1-201ENST00000429623 299 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 MTND5P15-201ENST00000434246 349 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 AC007389.2-201ENST00000434630 306 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 HLA-N-201ENST00000437516 135 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 HMGN2P13-201ENST00000476476 274 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 SNORA25.11-201ENST00000515935 105 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.673-201ENST00000516306 88 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.687-201ENST00000516558 91 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 MIR2114-201ENST00000516645 80 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 AC039056.2-201ENST00000622261 511 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms