Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNU6-277P-201ENST00000516272 106 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 RNU6-1183P-201ENST00000517054 60 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AP005639.2-201ENST00000527592 928 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 MIR3186-201ENST00000577404 85 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC100830.2-201ENST00000581636 240 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC113139.1-201ENST00000605049 239 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 MIR92B-201ENST00000607575 96 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 ZNF519P1-201ENST00000449011 1626 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC068647.1-201ENST00000489539 2265 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 U8.11-201ENST00000384699 133 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 U8.12-201ENST00000384701 133 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AL360182.1-201ENST00000397433 468 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 MIR548K-201ENST00000408406 116 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 RNA5SP38-201ENST00000410750 119 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 RPL31P12-201ENST00000422587 358 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 UBE2V1P4-201ENST00000425374 344 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 SKA2P1-201ENST00000425592 390 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 MTND4P28-201ENST00000426217 387 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 UBE2V1P7-201ENST00000446395 340 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 U8.18-201ENST00000459285 133 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 MTND4P17-201ENST00000470444 350 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AP000867.2-201ENST00000532468 320 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 NACAP3-201ENST00000552100 481 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AC012468.1-201ENST00000604888 430 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 AC092628.2-201ENST00000622492 339 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 MIR7153-201ENST00000637758 57 ntBASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM54Q9BYV2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
TRIM54Q9BYV2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 MFSD8-233ENST00000641482 4860 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 SNORD9-201ENST00000362566 104 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 Y_RNA.509-201ENST00000384506 99 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 RNU6-1106P-201ENST00000390845 107 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 RPL37P10-201ENST00000412884 288 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AL096701.2-201ENST00000416920 238 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AL357552.1-201ENST00000445254 415 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 MTND1P17-201ENST00000448961 204 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC092001.1-201ENST00000453012 261 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC233279.1-201ENST00000455300 423 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 BTF3P15-201ENST00000455606 336 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC010401.1-201ENST00000463867 348 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC130509.1-201ENST00000464158 433 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 RPL23AP67-201ENST00000465341 474 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 RPS27P27-201ENST00000498779 255 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC096745.1-201ENST00000509945 370 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 RN7SKP24-201ENST00000515888 284 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 SNORA70.19-201ENST00000516717 90 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC093027.1-201ENST00000546698 429 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AL391261.3-201ENST00000557194 520 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 LINC00933-203ENST00000559812 219 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms