Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MTND5P31-201ENST00000419366 1374 ntBASIC0.85□□□□□ -2.27
SCAPERQ9BY12 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
SCAPERQ9BY12 RNU6-217P-201ENST00000384164 104 ntBASIC0.85□□□□□ -2.27
SCAPERQ9BY12 HMGB1P17-201ENST00000403495 628 ntBASIC0.85□□□□□ -2.27
SCAPERQ9BY12 AL355615.1-201ENST00000406187 641 ntBASIC0.85□□□□□ -2.27
SCAPERQ9BY12 AC079776.3-201ENST00000450665 370 ntBASIC0.85□□□□□ -2.27
SCAPERQ9BY12 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
SCAPERQ9BY12 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.85□□□□□ -2.27
SCAPERQ9BY12 OR5AK1P-201ENST00000524837 922 ntBASIC0.85□□□□□ -2.27
SCAPERQ9BY12 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.85□□□□□ -2.27
SCAPERQ9BY12 AL161729.4-201ENST00000604650 476 ntBASIC0.85□□□□□ -2.27
SCAPERQ9BY12 MTND4LP5-201ENST00000605152 292 ntBASIC0.85□□□□□ -2.27
SCAPERQ9BY12 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.85□□□□□ -2.27
SCAPERQ9BY12 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SCAPERQ9BY12 Y_RNA.67-201ENST00000362870 100 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 SNORD82-201ENST00000365530 70 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
SCAPERQ9BY12 MED14P1-201ENST00000430517 648 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 RSU1P2-202ENST00000437884 485 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 PRPS1P1-201ENST00000445305 876 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 AL590365.1-201ENST00000450788 243 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.84□□□□□ -2.27
SCAPERQ9BY12 DUXAP8-207ENST00000456786 622 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 RNA5SP57-201ENST00000459463 123 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 RNA5SP476-201ENST00000516613 103 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.84□□□□□ -2.27
SCAPERQ9BY12 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.84□□□□□ -2.27
SCAPERQ9BY12 NIFKP8-201ENST00000560500 874 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 MIR4765-201ENST00000585007 77 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 NIFKP6-201ENST00000598115 845 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 MTCYBP22-201ENST00000603788 447 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 AC021851.1-201ENST00000608537 1082 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 AC024595.1-201ENST00000623088 387 ntBASIC0.84□□□□□ -2.27
SCAPERQ9BY12 RNU6-386P-201ENST00000362650 107 ntBASIC0.83□□□□□ -2.28
SCAPERQ9BY12 RNU6-1222P-201ENST00000384615 107 ntBASIC0.83□□□□□ -2.28
SCAPERQ9BY12 RPL23AP32-201ENST00000395315 459 ntBASIC0.83□□□□□ -2.28
SCAPERQ9BY12 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SCAPERQ9BY12 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.83□□□□□ -2.28
SCAPERQ9BY12 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SCAPERQ9BY12 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
SCAPERQ9BY12 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.83□□□□□ -2.28
SCAPERQ9BY12 AC092757.1-201ENST00000467293 467 ntBASIC0.83□□□□□ -2.28
SCAPERQ9BY12 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.83□□□□□ -2.28
SCAPERQ9BY12 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.83□□□□□ -2.28
SCAPERQ9BY12 MIR4422-201ENST00000581938 83 ntBASIC0.83□□□□□ -2.28
SCAPERQ9BY12 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.83□□□□□ -2.28
SCAPERQ9BY12 AP000238.1-201ENST00000608759 426 ntBASIC0.83□□□□□ -2.28
SCAPERQ9BY12 AL356585.4-201ENST00000623078 1229 ntBASIC0.83□□□□□ -2.28
SCAPERQ9BY12 RNA5SP240-201ENST00000365355 128 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AL449283.1-202ENST00000418249 604 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AL591043.1-201ENST00000432461 424 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.82□□□□□ -2.28
SCAPERQ9BY12 SNORA4.4-201ENST00000515921 135 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AC034114.1-201ENST00000520293 285 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AP003484.1-201ENST00000530974 250 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AL022067.1-201ENST00000602426 454 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AL391813.1-201ENST00000603098 260 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.82□□□□□ -2.28
SCAPERQ9BY12 AC009233.1-201ENST00000616477 371 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 MIR6130-201ENST00000619419 109 ntBASIC0.82□□□□□ -2.28
SCAPERQ9BY12 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
SCAPERQ9BY12 SNORD51-201ENST00000384320 80 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC009310.1-201ENST00000414414 451 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 FABP5P14-201ENST00000437273 393 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.81□□□□□ -2.28
SCAPERQ9BY12 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AL161651.1-201ENST00000440882 223 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 RPL26P6-201ENST00000440913 438 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 RPS20P10-201ENST00000451209 253 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC015724.1-201ENST00000478577 156 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 LRRC34P2-201ENST00000514850 553 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 RNU6-322P-201ENST00000516010 103 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC019288.1-201ENST00000557918 224 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AL356432.3-201ENST00000568952 465 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC087045.1-201ENST00000605856 382 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 DUXAP10-204ENST00000612052 616 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC099842.1-201ENST00000619919 596 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 LINC01347-201ENST00000417964 355 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AL354941.1-201ENST00000438600 464 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.81□□□□□ -2.28
SCAPERQ9BY12 RNU6-775P-201ENST00000459318 96 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 LARP1BP2-201ENST00000486594 519 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SCAPERQ9BY12 LSM6P2-201ENST00000552208 177 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC124947.2-202ENST00000552735 133 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 DUXAP1-201ENST00000556632 463 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC026271.5-201ENST00000577873 130 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 SUMO2P14-201ENST00000604488 293 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 AC009974.1-201ENST00000608881 455 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 MIR5739-201ENST00000619803 80 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms