Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 ZNF209P-201ENST00000593450 2304 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 MIR449A-201ENST00000362113 91 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 MIR208A-201ENST00000362287 71 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 RNU6-637P-201ENST00000384050 107 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 PIGFP2-201ENST00000421400 651 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AL035407.1-201ENST00000429211 571 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 RPL36AP53-201ENST00000432891 316 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC008628.1-201ENST00000508663 265 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC103833.1-201ENST00000517442 172 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC109329.1-201ENST00000518744 317 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC087276.1-201ENST00000529659 480 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 SUB1P4-201ENST00000566062 339 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 DPPA3P3-201ENST00000603842 430 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AL645939.4-201ENST00000604495 135 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC034229.4-201ENST00000607861 441 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC009318.2-201ENST00000610917 651 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 MIR6845-201ENST00000613182 61 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
VPS25Q9BRG1 DDX43P2-201ENST00000604753 1354 ntBASIC0.69□□□□□ -2.3
VPS25Q9BRG1 AP005901.5-201ENST00000545779 1796 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
VPS25Q9BRG1 Y_RNA.234-201ENST00000364409 97 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS25Q9BRG1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
VPS25Q9BRG1 TMSB4XP8-201ENST00000402089 135 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 RNU2-32P-201ENST00000411193 191 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 TPMTP3-201ENST00000411928 735 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 TMSB4XP6-201ENST00000415187 135 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 EIF1P1-201ENST00000421436 341 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 TMSB4XP1-201ENST00000424567 135 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 VN1R42P-201ENST00000424651 344 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AL121578.1-201ENST00000428051 892 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.68□□□□□ -2.3
VPS25Q9BRG1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS25Q9BRG1 RPL39P6-201ENST00000448289 150 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AC013267.1-201ENST00000458227 267 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 UBL5P3-201ENST00000475112 231 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AC108078.1-201ENST00000508073 725 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS25Q9BRG1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS25Q9BRG1 CYP3A52P-201ENST00000563326 91 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS25Q9BRG1 RNU6-91P-201ENST00000607774 107 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AC009269.6-201ENST00000621778 588 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AC099654.5-201ENST00000636479 350 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AC092881.1-201ENST00000638218 2733 ntBASIC0.68□□□□□ -2.3
VPS25Q9BRG1 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 NACAP2-201ENST00000318548 624 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 RNU6-1167P-201ENST00000363227 94 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 RNU6-743P-201ENST00000364151 106 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 RNU6-353P-201ENST00000364266 108 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 RNA5SP190-201ENST00000365222 118 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 RNU6-1274P-201ENST00000384557 107 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 SNORA40.6-201ENST00000391153 128 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 RSL24D1P4-201ENST00000400938 484 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 TAF13P2-201ENST00000416876 286 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 JTBP1-201ENST00000441314 247 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC108729.2-201ENST00000476543 840 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC004223.1-201ENST00000479840 271 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 FAM92A1P2-202ENST00000504766 877 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC116655.1-201ENST00000508324 901 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 SCARNA16.2-201ENST00000516520 172 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 RNU6-965P-201ENST00000516721 96 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 YWHAZP1-201ENST00000556286 722 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC233266.2-201ENST00000567067 528 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC103987.3-201ENST00000582071 292 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AL391646.1-201ENST00000603860 190 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AL161798.1-201ENST00000604630 131 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AL583856.2-201ENST00000606298 543 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC092140.2-201ENST00000618027 521 ntBASIC0.67□□□□□ -2.3
VPS25Q9BRG1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.67□□□□□ -2.3
VPS25Q9BRG1 AC002543.1-201ENST00000299783 1954 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 RNU6-1078P-201ENST00000364522 103 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms