Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDCA3Q99618 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDCA3Q99618 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.71□□□□□ -1.97
CDCA3Q99618 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA3Q99618 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.71□□□□□ -1.98
CDCA3Q99618 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
CDCA3Q99618 RNA5SP289-201ENST00000362332 137 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CDCA3Q99618 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 RNU2-9P-201ENST00000410194 145 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 RPL19P1-201ENST00000411635 428 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.71□□□□□ -1.98
CDCA3Q99618 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA3Q99618 AC073464.1-201ENST00000429823 534 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AL139415.2-201ENST00000431968 163 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AC002486.1-201ENST00000435098 391 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA3Q99618 AL714022.1-201ENST00000439897 151 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.71□□□□□ -1.98
CDCA3Q99618 snoU13.23-201ENST00000458863 104 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 RPL21P41-201ENST00000459863 264 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 RPS15AP34-201ENST00000487776 387 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 RPS29P20-201ENST00000489592 171 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AC139453.3-201ENST00000493276 369 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AC108078.1-201ENST00000508073 725 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 RNU6-914P-201ENST00000516749 109 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA3Q99618 OR5AL2P-201ENST00000532185 920 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA3Q99618 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA3Q99618 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.71□□□□□ -1.98
CDCA3Q99618 AC025449.1-201ENST00000603896 529 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 RPL23AP88-201ENST00000605759 454 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AL359547.2-201ENST00000615810 418 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 AL512643.1-201ENST00000635735 524 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 OR5AK4P-201ENST00000635912 903 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 MAPK10-322ENST00000641485 4530 ntBASIC2.71□□□□□ -1.98
CDCA3Q99618 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
CDCA3Q99618 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.7□□□□□ -1.98
CDCA3Q99618 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDCA3Q99618 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDCA3Q99618 Y_RNA.41-201ENST00000362646 102 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 Y_RNA.159-201ENST00000363674 87 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 SNORA62.1-201ENST00000364287 154 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 CD24P4-201ENST00000382840 243 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 Y_RNA.534-201ENST00000384599 112 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 MIR518C-201ENST00000384822 101 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AL512633.1-201ENST00000399931 655 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDCA3Q99618 AL451074.5-201ENST00000415894 435 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.7□□□□□ -1.98
CDCA3Q99618 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDCA3Q99618 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.7□□□□□ -1.98
CDCA3Q99618 AC011816.1-201ENST00000441346 546 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 HIGD1AP2-201ENST00000446367 280 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AL353705.4-201ENST00000449661 238 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.7□□□□□ -1.98
CDCA3Q99618 MRPS17P3-201ENST00000465453 385 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AC006512.1-201ENST00000468816 291 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AC079382.1-201ENST00000493346 557 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AC107401.1-201ENST00000503426 685 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 SUMO2P6-201ENST00000505273 288 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 RPL37P25-201ENST00000507308 276 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.7□□□□□ -1.98
CDCA3Q99618 AC022880.1-201ENST00000534017 973 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AC010546.1-201ENST00000569391 485 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AC008521.1-201ENST00000587471 187 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 NUTF2P8-201ENST00000604593 363 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AL670379.4-201ENST00000605279 254 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AC012409.4-201ENST00000612923 249 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AC015540.1-201ENST00000615828 501 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AL158209.2-201ENST00000619266 216 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 AL157786.1-207ENST00000627771 695 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 U6.114-201ENST00000636407 96 ntBASIC2.7□□□□□ -1.98
CDCA3Q99618 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDCA3Q99618 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CDCA3Q99618 AC103710.2-202ENST00000641454 2853 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 MTND5P17-201ENST00000418405 1603 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 SNORD115-7-201ENST00000365306 82 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 RNU6-1103P-201ENST00000384150 107 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 Y_RNA.576-201ENST00000384781 102 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 MIR454-201ENST00000390180 115 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CDCA3Q99618 RN7SKP223-201ENST00000410582 62 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 RNU4-55P-201ENST00000410731 137 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 RNA5SP111-201ENST00000411386 101 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.69□□□□□ -1.98
CDCA3Q99618 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.69□□□□□ -1.98
CDCA3Q99618 AL513477.1-202ENST00000417061 214 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 MTATP6P18-201ENST00000417994 673 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 BX276092.3-201ENST00000424182 230 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDCA3Q99618 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.69□□□□□ -1.98
CDCA3Q99618 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDCA3Q99618 AC022364.2-201ENST00000457963 554 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 RN7SL75P-201ENST00000461926 281 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.69□□□□□ -1.98
CDCA3Q99618 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.69□□□□□ -1.98
CDCA3Q99618 AC109927.2-201ENST00000506416 303 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms