Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 SUB1P3-201ENST00000564581 315 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AC006600.1-201ENST00000572529 153 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR1254-2-201ENST00000579553 63 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR4644-201ENST00000579929 84 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR3910-1-201ENST00000580936 111 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AC073410.2-201ENST00000603240 332 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA62.6-201ENST00000606322 83 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AC008669.1-201ENST00000565823 2178 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AC011978.2-201ENST00000569835 2054 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA31-201ENST00000362607 130 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 Y_RNA.274-201ENST00000364714 101 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA48.7-201ENST00000391302 135 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-1156P-201ENST00000410365 100 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-121P-201ENST00000410525 99 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AL137014.1-201ENST00000420490 1226 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 MTCO3P8-201ENST00000453691 755 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 ANP32BP2-201ENST00000454525 545 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AL139109.1-201ENST00000455491 297 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU2-58P-201ENST00000516403 183 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-897P-201ENST00000517135 105 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AP003385.6-201ENST00000531603 374 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AC130289.1-201ENST00000577321 73 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR3158-1-201ENST00000583596 81 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AC007619.2-201ENST00000605743 379 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AL121772.2-201ENST00000614331 297 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AL359547.2-201ENST00000615810 418 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AC006133.1-201ENST00000617106 264 ntBASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.92□□□□□ -1.78
CDK5RAP1Q96SZ6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 OR56A5-201ENST00000340110 738 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-434P-201ENST00000384376 107 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 Y_RNA.555-201ENST00000384673 110 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 U8.11-201ENST00000384699 133 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 U8.12-201ENST00000384701 133 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL21P17-201ENST00000397467 475 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-387P-201ENST00000411331 105 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 SYF2P2-201ENST00000417620 583 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL23AP69-201ENST00000431134 458 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 U8.18-201ENST00000459285 133 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 AC010631.1-201ENST00000474150 156 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 RN7SL432P-201ENST00000484057 298 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 AC018437.1-201ENST00000492214 406 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 AC078918.1-201ENST00000498515 228 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 RAC1P2-201ENST00000511164 579 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA67.7-201ENST00000516664 135 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 CBX3P8-201ENST00000532412 525 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 AC012119.1-201ENST00000603184 222 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR1244-1-201ENST00000612829 85 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 FTX_2.1-201ENST00000618816 94 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 AC039056.2-201ENST00000622261 511 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR1244-3-201ENST00000635744 85 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR1244-2-201ENST00000636449 85 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR1244-4-202ENST00000636813 85 ntBASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP1Q96SZ6 OTUD4P1-201ENST00000237841 3067 ntBASIC3.9□□□□□ -1.78
CDK5RAP1Q96SZ6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.9□□□□□ -1.78
CDK5RAP1Q96SZ6 RNA5SP189-201ENST00000364920 115 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-708P-201ENST00000384217 107 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORA51.11-201ENST00000384442 131 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-493P-201ENST00000391321 108 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 RHEBP3-201ENST00000411920 351 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms