Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC068787.1-201ENST00000623908 691 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 AL136313.1-201ENST00000624804 202 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 PISRT1-201ENST00000626175 531 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
COL21A1Q96P44 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL21A1Q96P44 RNU6-188P-201ENST00000364207 107 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 Y_RNA.226-201ENST00000364337 114 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 Y_RNA.302-201ENST00000364997 102 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 RNU6-253P-201ENST00000384730 105 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 MIR513B-201ENST00000385136 84 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 CYCSP48-201ENST00000417124 323 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 AL022400.1-201ENST00000423946 935 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 RPL30P4-201ENST00000429309 333 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 Z98742.2-201ENST00000431564 187 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AL591704.1-201ENST00000432574 275 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 CR769776.1-201ENST00000441254 787 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 RPL21P99-201ENST00000480369 423 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 RNU6-311P-201ENST00000516224 102 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 RNU6-1183P-201ENST00000517054 60 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 AC084851.1-201ENST00000529105 249 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 MIR3146-201ENST00000580367 79 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AP001004.1-201ENST00000582468 324 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 MIR4307-201ENST00000582802 84 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 AC025165.5-201ENST00000602802 578 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AL365204.3-201ENST00000612448 685 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AC098657.3-201ENST00000620434 263 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AC008993.2-201ENST00000631744 806 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
COL21A1Q96P44 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.9□□□□□ -2.11
COL21A1Q96P44 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL21A1Q96P44 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 Y_RNA.118-201ENST00000363300 101 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 RNA5SP240-201ENST00000365355 128 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 RNU6-14P-201ENST00000384630 106 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC119751.3-201ENST00000399720 670 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AL030996.1-201ENST00000411430 235 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 RPL23AP39-201ENST00000415533 405 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AL353621.1-201ENST00000418219 243 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AL353777.1-201ENST00000425552 326 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC027124.2-201ENST00000428249 105 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 RPL7P34-201ENST00000433316 712 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC124916.1-201ENST00000444020 547 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 OR6C5P-201ENST00000452388 923 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC034244.1-201ENST00000507687 207 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 RNU2-10P-201ENST00000516375 211 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 RN7SKP265-201ENST00000516448 223 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 HSPE1P18-201ENST00000517602 280 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC011979.2-201ENST00000527568 352 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 NRBF2P1-201ENST00000587407 859 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AL356266.1-201ENST00000623311 483 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 U6.99-201ENST00000637524 83 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 MTND5P42-201ENST00000637720 498 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
COL21A1Q96P44 AC104454.1-201ENST00000421341 1401 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.89□□□□□ -2.11
COL21A1Q96P44 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL21A1Q96P44 RNU6-701P-201ENST00000384059 107 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 MIR218-1-201ENST00000384999 110 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 RNU2-63P-201ENST00000410792 194 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC078974.1-201ENST00000411597 223 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AL139156.1-201ENST00000412785 841 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 EIF4EP4-201ENST00000424916 578 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 MTND4P25-201ENST00000441039 533 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms