Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AL359672.1-201ENST00000442302 409 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 RPS24P13-201ENST00000442520 397 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 RAB9AP1-201ENST00000449393 573 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 AC096745.1-201ENST00000509945 370 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 RNU7-143P-201ENST00000516781 65 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 IGKV2-38-201ENST00000517443 247 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 AL158032.1-201ENST00000605401 106 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 SNORD58B-201ENST00000607313 66 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 AL110115.1-201ENST00000614396 364 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 AL359547.2-201ENST00000615810 418 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 AC007998.5-201ENST00000622938 237 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 DDX10P1-201ENST00000448545 1933 ntBASIC3.24□□□□□ -1.89
ZNF48Q96MX3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF48Q96MX3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.2-201ENST00000362330 96 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.396-201ENST00000383949 103 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.485-201ENST00000384395 102 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.489-201ENST00000384410 101 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 RNU2-23P-201ENST00000410545 195 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 RNU6-55P-201ENST00000411092 107 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC092809.3-201ENST00000415453 231 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 MRPS18CP6-201ENST00000423587 223 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 SUMO1P3-201ENST00000439961 304 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 PCNPP5-201ENST00000452246 481 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC234775.1-201ENST00000454247 670 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC112492.4-201ENST00000456549 352 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 RPL7P23-201ENST00000493874 747 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC009901.1-201ENST00000506703 541 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 SNORA31.8-201ENST00000516327 108 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 RNU6-307P-201ENST00000516743 106 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AP006587.4-201ENST00000526053 529 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC025423.5-201ENST00000550230 219 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC174048.1-201ENST00000603389 144 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AL355297.3-201ENST00000604082 446 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AL031176.1-201ENST00000604554 466 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC012603.1-201ENST00000606424 528 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 AL606534.2-204ENST00000635008 178 ntBASIC3.23□□□□□ -1.89
ZNF48Q96MX3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF48Q96MX3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RNU6-874P-201ENST00000362390 105 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.106-201ENST00000363189 100 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RNU6-1059P-201ENST00000363752 98 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RNU6-266P-201ENST00000364225 107 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.380-201ENST00000365663 111 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RNU6-190P-201ENST00000384154 102 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RNU6-842P-201ENST00000384269 107 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 SNORA41-201ENST00000384675 132 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 MIR23A-201ENST00000385245 73 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RPS4XP7-201ENST00000406274 780 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 MIR548I3-201ENST00000408378 149 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 MIR548I1-201ENST00000408810 149 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RN7SKP156-201ENST00000410308 342 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RNA5SP306-201ENST00000411087 107 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RNU6-293P-201ENST00000411259 106 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 SUMO1P2-201ENST00000452524 304 ntBASIC3.22□□□□□ -1.89
ZNF48Q96MX3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.22□□□□□ -1.89
ZNF48Q96MX3 RN7SL323P-201ENST00000494712 295 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms