Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 SNORA70.19-201ENST00000516717 90 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 SNORA25.17-201ENST00000517184 124 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 AC069113.1-201ENST00000517763 267 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 AC026403.1-201ENST00000518938 295 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 AC002044.1-201ENST00000606707 158 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC138Q96M89 AP003122.5-201ENST00000527668 3766 ntBASIC3.4□□□□□ -1.86
CCDC138Q96M89 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CCDC138Q96M89 RNU6-266P-201ENST00000364225 107 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 SNORA70.4-201ENST00000365509 134 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 RNU6-332P-201ENST00000391193 108 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 RPL7P10-201ENST00000417407 739 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC138Q96M89 MRPS10P2-201ENST00000431226 381 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC138Q96M89 AC006483.1-201ENST00000487308 313 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC138Q96M89 SNORA14.1-201ENST00000516113 141 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 Y_RNA.687-201ENST00000516558 91 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC138Q96M89 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC138Q96M89 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC138Q96M89 AC005261.5-201ENST00000596280 355 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 AC008739.2-201ENST00000597006 317 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 AL035413.2-201ENST00000604801 525 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 ATP1B3P1-201ENST00000605365 821 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC138Q96M89 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC138Q96M89 AC005858.4-201ENST00000623191 700 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 AC002064.3-201ENST00000623448 346 ntBASIC3.4□□□□□ -1.87
CCDC138Q96M89 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
CCDC138Q96M89 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC138Q96M89 AC121333.1-201ENST00000567488 2709 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC138Q96M89 SNORA71.3-201ENST00000362582 128 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 RNU1-100P-201ENST00000365255 165 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC093578.1-201ENST00000415219 368 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AL353678.1-201ENST00000422735 741 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 MTND1P2-201ENST00000430604 821 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 AL671855.1-201ENST00000446875 1203 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC006026.2-201ENST00000457376 180 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 HMGN2P26-201ENST00000463169 339 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 TBCAP3-201ENST00000512475 312 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC068657.1-201ENST00000520807 306 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 AP004607.1-201ENST00000524456 203 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 MIR4444-1-201ENST00000581696 74 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 MIR4444-2-201ENST00000584390 74 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC008739.3-201ENST00000603262 127 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC091152.3-201ENST00000604227 325 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 MIR6075-201ENST00000620782 95 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.39□□□□□ -1.87
CCDC138Q96M89 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC138Q96M89 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC138Q96M89 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC138Q96M89 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC138Q96M89 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 MIR30E-201ENST00000362104 92 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 Y_RNA.157-201ENST00000363638 102 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 SNORD46.1-201ENST00000364139 104 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 RNU6-522P-201ENST00000364497 107 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 Y_RNA.333-201ENST00000365274 102 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 RNU6-19P-201ENST00000384718 107 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 MIR200C-201ENST00000384980 68 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 Y_RNA.615-201ENST00000410769 117 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 HMGN2P31-201ENST00000432430 273 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 AL159987.2-201ENST00000432754 307 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 AC114781.4-201ENST00000513707 639 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms