Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL157871.3-201ENST00000557231 293 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 AL355375.2-201ENST00000574825 175 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 MIR1273C-201ENST00000578669 77 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 MIR5692C1-201ENST00000585309 91 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 AC136601.2-201ENST00000604356 474 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 AC135507.2-201ENST00000612443 309 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 uc_338.15-201ENST00000615470 191 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 MTCO1P12-201ENST00000414273 1543 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS50Q96JG6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS50Q96JG6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS50Q96JG6 RNA5SP383-201ENST00000362934 120 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 SNORD113-7-201ENST00000363762 77 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 Y_RNA.535-201ENST00000384612 99 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 RNU6-1179P-201ENST00000384667 107 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 SAR1AP2-201ENST00000392696 594 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 MIR450B-201ENST00000401182 78 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 RNU6-1025P-201ENST00000410629 104 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 SYF2P2-201ENST00000417620 583 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 AL158156.1-201ENST00000422509 473 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 AP000907.1-201ENST00000428428 510 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 RNU1-86P-201ENST00000516108 154 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 Y_RNA.682-201ENST00000516457 100 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 Y_RNA.691-201ENST00000516611 103 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 RNU6-1069P-201ENST00000516612 133 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 RNU1-107P-201ENST00000516617 154 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 RNU6-256P-201ENST00000516747 97 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AC009902.1-201ENST00000519351 183 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AP000889.2-201ENST00000532684 490 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS50Q96JG6 SRGNP1-201ENST00000603392 451 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AC104237.2-201ENST00000612456 443 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 MIR1302-1-201ENST00000637932 143 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 AC007656.2-201ENST00000624902 4547 ntBASIC3.41□□□□□ -1.86
VPS50Q96JG6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.4□□□□□ -1.86
VPS50Q96JG6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
VPS50Q96JG6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.4□□□□□ -1.86
VPS50Q96JG6 CUL1P1-201ENST00000509510 2425 ntBASIC3.4□□□□□ -1.86
VPS50Q96JG6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS50Q96JG6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS50Q96JG6 Y_RNA.33-201ENST00000362591 102 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 RNU4-79P-201ENST00000362764 141 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 Y_RNA.67-201ENST00000362870 100 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 U3.19-201ENST00000390893 196 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS50Q96JG6 CYCSP33-201ENST00000414485 327 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 MTND4P28-201ENST00000426217 387 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AL590383.1-201ENST00000428602 75 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AL353705.1-201ENST00000433468 480 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 Z82210.1-201ENST00000440037 231 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC104472.2-201ENST00000469035 601 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 SNORA31.1-201ENST00000515993 133 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 SNORA31.5-201ENST00000516190 133 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 RNA5SP165-201ENST00000517142 115 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 SNORA25.17-201ENST00000517184 124 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 ATP5F1P5-201ENST00000526403 760 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 MIR5692A1-201ENST00000580523 69 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 AL133393.1-201ENST00000603277 287 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC004805.2-201ENST00000605382 482 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC069200.1-201ENST00000609511 323 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 AL031601.2-202ENST00000622650 282 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS50Q96JG6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS50Q96JG6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS50Q96JG6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS50Q96JG6 AL049781.1-201ENST00000623195 3585 ntBASIC3.4□□□□□ -1.87
VPS50Q96JG6 MTND5P1-201ENST00000445440 1375 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC138393.1-203ENST00000327086 343 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 MIR148B-201ENST00000362252 99 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 RNU6-266P-201ENST00000364225 107 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 MIR301A-201ENST00000385261 86 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS50Q96JG6 FAT1P1-201ENST00000406588 507 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 SNORA11.1-201ENST00000408133 129 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms