Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DDX11Q96FC9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.32□□□□□ -1.72
DDX11Q96FC9 AC090774.1-201ENST00000435925 246 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.32□□□□□ -1.72
DDX11Q96FC9 RPS3AP46-201ENST00000448352 682 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 RN7SL293P-201ENST00000481765 281 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 AC026801.1-201ENST00000497178 464 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 AC026801.2-201ENST00000515352 425 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 RNA5SP384-201ENST00000516615 116 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 RNU6-635P-201ENST00000516651 102 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 RNA5SP309-201ENST00000516670 106 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
DDX11Q96FC9 CYCSP27-201ENST00000527643 293 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 OR5D17P-201ENST00000531492 978 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 GNAI2P1-201ENST00000541815 315 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.32□□□□□ -1.72
DDX11Q96FC9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.32□□□□□ -1.72
DDX11Q96FC9 MIR3922-201ENST00000585192 84 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 AC018889.1-201ENST00000605372 397 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 MIR6130-201ENST00000619419 109 ntBASIC4.32□□□□□ -1.72
DDX11Q96FC9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DDX11Q96FC9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
DDX11Q96FC9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.32□□□□□ -1.72
DDX11Q96FC9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
DDX11Q96FC9 PRO1804-201ENST00000623780 2050 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.31□□□□□ -1.72
DDX11Q96FC9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
DDX11Q96FC9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
DDX11Q96FC9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DDX11Q96FC9 RNA5SP72-201ENST00000364442 117 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 RNA5SP235-201ENST00000365411 114 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 Y_RNA.556-201ENST00000384677 113 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 MIR183-201ENST00000384958 110 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 AC243428.1-201ENST00000421099 264 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 AL159169.1-201ENST00000421119 127 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.31□□□□□ -1.72
DDX11Q96FC9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.31□□□□□ -1.72
DDX11Q96FC9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.31□□□□□ -1.72
DDX11Q96FC9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
DDX11Q96FC9 AC087854.1-201ENST00000519706 414 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.31□□□□□ -1.72
DDX11Q96FC9 AC103783.1-201ENST00000520506 373 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 RNU6-323P-201ENST00000521915 107 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 AC008489.1-201ENST00000524271 483 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 AL121603.1-201ENST00000553815 142 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.31□□□□□ -1.72
DDX11Q96FC9 AC005592.1-201ENST00000566527 1640 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DDX11Q96FC9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DDX11Q96FC9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
DDX11Q96FC9 CDC27P3-201ENST00000635418 1910 ntBASIC4.31□□□□□ -1.72
DDX11Q96FC9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.3□□□□□ -1.72
DDX11Q96FC9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX11Q96FC9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.3□□□□□ -1.72
DDX11Q96FC9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX11Q96FC9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX11Q96FC9 AC138393.1-203ENST00000327086 343 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 Z99755.1-201ENST00000414048 380 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 PPP1R11P2-201ENST00000423543 382 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 USMG5P1-201ENST00000425964 177 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 AL591704.1-201ENST00000432574 275 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 NEFMP1-201ENST00000443423 1006 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 CYCSP35-201ENST00000451978 304 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.3□□□□□ -1.72
DDX11Q96FC9 RNU6-1095P-201ENST00000516148 108 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 Y_RNA.668-201ENST00000516233 93 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 RNU6-390P-201ENST00000516259 103 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 RN7SKP60-201ENST00000516985 239 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX11Q96FC9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX11Q96FC9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.3□□□□□ -1.72
DDX11Q96FC9 AC005951.2-201ENST00000576282 495 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.3□□□□□ -1.72
DDX11Q96FC9 AC011494.1-201ENST00000596454 237 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 RNU1-30P-201ENST00000606575 163 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 AC096577.2-201ENST00000611455 153 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 AC107871.2-201ENST00000612894 502 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.3□□□□□ -1.72
DDX11Q96FC9 AC007656.2-201ENST00000624902 4547 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX11Q96FC9 TNPO1P3-201ENST00000436471 2662 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX11Q96FC9 MAPK10-372ENST00000641954 3413 ntBASIC4.3□□□□□ -1.72
DDX11Q96FC9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX11Q96FC9 SNORD62.1-201ENST00000362541 86 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX11Q96FC9 DEFB109C-201ENST00000382575 264 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 DEFB109B-201ENST00000382656 264 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 Y_RNA.428-201ENST00000384078 102 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 RNU6-190P-201ENST00000384154 102 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX11Q96FC9 RNU6-712P-201ENST00000410558 100 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 DPH3P2-201ENST00000422618 250 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 USP9YP30-201ENST00000430729 455 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 AC004866.2-201ENST00000438285 481 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 RPS3AP12-201ENST00000443616 753 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms