Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC026784.1-201ENST00000507986 352 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 MTCO3P44-201ENST00000510977 541 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 SNORA70.24-201ENST00000517233 118 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 RN7SKP289-201ENST00000517244 295 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 SNORA81.3-201ENST00000517283 198 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC022868.1-201ENST00000517767 391 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 HSBP1P1-201ENST00000555205 166 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC011494.1-201ENST00000596454 237 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC020914.4-201ENST00000597690 277 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC006254.3-201ENST00000603353 884 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 AL138713.1-201ENST00000624026 2130 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC091925.2-201ENST00000625059 256 ntBASIC3.84□□□□□ -1.79
CHFRQ96EP1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.79
CHFRQ96EP1 AC097714.1-201ENST00000511272 1647 ntBASIC3.84□□□□□ -1.8
CHFRQ96EP1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.84□□□□□ -1.8
CHFRQ96EP1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CHFRQ96EP1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.83□□□□□ -1.8
CHFRQ96EP1 AC073346.2-201ENST00000624724 2058 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.83□□□□□ -1.8
CHFRQ96EP1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.83□□□□□ -1.8
CHFRQ96EP1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHFRQ96EP1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHFRQ96EP1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHFRQ96EP1 ZNF962P-201ENST00000443465 3140 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 Y_RNA.39-201ENST00000362620 98 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 Y_RNA.64-201ENST00000362845 102 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 RNU6-97P-201ENST00000363387 104 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 RNVU1-3-201ENST00000364313 161 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 SNORD113-1-201ENST00000365321 69 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 RNU6-1127P-201ENST00000384580 107 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 MIR483-201ENST00000385070 76 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 BX682237.1-201ENST00000415016 335 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 CYCSP4-201ENST00000429682 331 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 USP9YP30-201ENST00000430729 455 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.83□□□□□ -1.8
CHFRQ96EP1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.83□□□□□ -1.8
CHFRQ96EP1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.83□□□□□ -1.8
CHFRQ96EP1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHFRQ96EP1 CYCSP35-201ENST00000451978 304 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 SNORD5.1-201ENST00000458800 75 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 DYNLL1P5-201ENST00000467158 270 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 RPL7P5-201ENST00000471472 736 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 TBCAP3-201ENST00000512475 312 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHFRQ96EP1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHFRQ96EP1 HSPE1P20-201ENST00000538133 289 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 AC090115.3-201ENST00000553218 849 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 SETP2-201ENST00000553886 926 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 MIR3133-201ENST00000583157 78 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 SDR42E1P2-201ENST00000614861 481 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 SDR42E1P4-201ENST00000620894 481 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 MTND5P6-201ENST00000422338 1798 ntBASIC3.83□□□□□ -1.8
CHFRQ96EP1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.83□□□□□ -1.8
CHFRQ96EP1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHFRQ96EP1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHFRQ96EP1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHFRQ96EP1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHFRQ96EP1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHFRQ96EP1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHFRQ96EP1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHFRQ96EP1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHFRQ96EP1 TPTE2P4-201ENST00000258589 1605 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 RNA5SP258-201ENST00000362750 119 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 RNU6-1059P-201ENST00000363752 98 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 RNU6-188P-201ENST00000364207 107 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 Y_RNA.276-201ENST00000364732 109 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 SNORD14.1-201ENST00000365609 90 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 RNU6-550P-201ENST00000391057 101 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 PCNPP3-201ENST00000393579 471 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 AL583834.1-201ENST00000406943 343 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 RNU6-55P-201ENST00000411092 107 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 RAC1P7-201ENST00000445367 377 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 HMGN2P16-201ENST00000456802 261 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 AC084198.1-201ENST00000477747 402 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 AC104806.1-201ENST00000508720 308 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 RNU2-10P-201ENST00000516375 211 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 RNU6-1069P-201ENST00000516612 133 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 RNU1-54P-201ENST00000517181 120 ntBASIC3.82□□□□□ -1.8
CHFRQ96EP1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHFRQ96EP1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.82□□□□□ -1.8
CHFRQ96EP1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms