Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC079448.1-201ENST00000449377 373 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC080013.2-201ENST00000460866 323 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC083906.5-201ENST00000503722 328 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC091826.1-201ENST00000514065 313 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 RNU6-445P-201ENST00000516949 107 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 RNU6-430P-201ENST00000517078 107 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 MTCO2P4-201ENST00000517968 247 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AP004607.1-201ENST00000524456 203 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC010186.2-204ENST00000537668 439 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.07□□□□□ -1.92
SKA1Q96BD8 MIR4528-201ENST00000577763 90 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 RNU6-91P-201ENST00000607774 107 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AL359198.2-201ENST00000611836 194 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC011890.2-201ENST00000613393 294 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 uc_338.11-201ENST00000619132 160 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC138627.2-201ENST00000624202 601 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC009161.2-201ENST00000624626 138 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.07□□□□□ -1.92
SKA1Q96BD8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.07□□□□□ -1.92
SKA1Q96BD8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SKA1Q96BD8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SKA1Q96BD8 SNORD14B-201ENST00000364533 90 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 RNU6-282P-201ENST00000365357 103 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SKA1Q96BD8 RNU6-116P-201ENST00000384042 109 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 RNU6-348P-201ENST00000384386 107 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 Y_RNA.553-201ENST00000384670 102 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 FTH1P15-201ENST00000406984 280 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 U6atac.2-201ENST00000408644 118 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 EEF1A1P40-201ENST00000412883 573 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 AL031779.1-201ENST00000415663 330 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 RPL21P90-201ENST00000415692 466 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 C1DP4-201ENST00000455429 424 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 AC006026.2-201ENST00000457376 180 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 MRPL42P6-201ENST00000486397 371 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SKA1Q96BD8 RNU5B-3P-201ENST00000516601 115 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 RNA5SP503-201ENST00000517047 117 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 AC105245.1-201ENST00000581934 244 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 MIR4298-201ENST00000584380 73 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 ELOCP29-201ENST00000588193 334 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 AC010620.1-201ENST00000601088 1102 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 AC099842.1-201ENST00000619919 596 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 SCARNA4-202ENST00000625402 129 ntBASIC3.06□□□□□ -1.92
SKA1Q96BD8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
SKA1Q96BD8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SKA1Q96BD8 RNU6-371P-201ENST00000364283 108 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 RNU4-48P-201ENST00000365559 182 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 SNORD116-9-201ENST00000384000 95 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 SNORD116-3-201ENST00000384287 95 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 SNORD116-7-201ENST00000384404 95 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 SNORD116-5-201ENST00000384462 95 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SKA1Q96BD8 RPL30P4-201ENST00000429309 333 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AL031667.1-201ENST00000440222 725 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 HIGD1AP2-201ENST00000446367 280 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC103975.1-201ENST00000482506 483 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 AIG1P1-201ENST00000503376 148 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC010424.1-201ENST00000506336 297 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC117522.3-201ENST00000507974 584 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC010493.1-201ENST00000513479 292 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC114781.4-201ENST00000513707 639 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC117532.1-201ENST00000514638 323 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AP002963.1-201ENST00000530590 184 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC009163.5-201ENST00000575421 637 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 MTCO3P13-201ENST00000577757 781 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC119751.7-201ENST00000600494 245 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC096772.1-201ENST00000609146 564 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC107871.2-201ENST00000612894 502 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC011155.2-201ENST00000623202 216 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 AC244517.12-201ENST00000623581 663 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 Z75746.1-201ENST00000440243 2080 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SKA1Q96BD8 HSPA8P4-201ENST00000511877 1920 ntBASIC3.05□□□□□ -1.92
SKA1Q96BD8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms