Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC018462.2-201ENST00000605375 395 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 AC019193.3-201ENST00000609144 554 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 AC133104.2-201ENST00000615272 193 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 MIR6128-201ENST00000615528 109 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 RMST_4.1-201ENST00000616886 107 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.05□□□□□ -1.76
ERCC4Q92889 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 AC093908.1-201ENST00000623125 8092 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.04□□□□□ -1.76
ERCC4Q92889 Y_RNA.5-201ENST00000362334 102 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 Y_RNA.28-201ENST00000362554 111 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 Y_RNA.145-201ENST00000363527 102 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 RNU6-512P-201ENST00000364438 103 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 RNU6-1040P-201ENST00000383974 107 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC4Q92889 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC4Q92889 UBE2D3P2-201ENST00000424409 445 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 GPM6BP2-201ENST00000432046 144 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.04□□□□□ -1.76
ERCC4Q92889 GPM6BP1-201ENST00000446387 144 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.04□□□□□ -1.76
ERCC4Q92889 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.04□□□□□ -1.76
ERCC4Q92889 FABP5P15-201ENST00000453566 214 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
ERCC4Q92889 SNORD5.1-201ENST00000458800 75 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 RPS4XP13-201ENST00000483219 789 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 RPS15AP34-201ENST00000487776 387 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AC096745.1-201ENST00000509945 370 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.04□□□□□ -1.76
ERCC4Q92889 SNORA31.8-201ENST00000516327 108 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC4Q92889 AP003122.3-201ENST00000526316 255 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AC084851.1-201ENST00000529105 249 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.04□□□□□ -1.76
ERCC4Q92889 AC025423.5-201ENST00000550230 219 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.04□□□□□ -1.76
ERCC4Q92889 AC002545.1-201ENST00000592511 181 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AC016925.2-201ENST00000605108 242 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 SNORA51-201ENST00000606420 132 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AC005344.1-201ENST00000613391 459 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 ATP5A1P2-202ENST00000616464 443 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 PLCE1P1-201ENST00000622094 305 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.04□□□□□ -1.76
ERCC4Q92889 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.04□□□□□ -1.76
ERCC4Q92889 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
ERCC4Q92889 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ERCC4Q92889 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ERCC4Q92889 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC4Q92889 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
ERCC4Q92889 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC4Q92889 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.04□□□□□ -1.76
ERCC4Q92889 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.03□□□□□ -1.76
ERCC4Q92889 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.03□□□□□ -1.76
ERCC4Q92889 AC138393.1-203ENST00000327086 343 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 MIR30E-201ENST00000362104 92 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 SNORD62.1-201ENST00000362541 86 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 SNORA75B-201ENST00000384053 137 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 RNU6-214P-201ENST00000384130 107 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 MIR134-201ENST00000385258 73 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 RN7SKP202-201ENST00000410439 330 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 AC018865.2-201ENST00000423631 129 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 UBE2V1P4-201ENST00000425374 344 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 AL158071.1-201ENST00000430315 461 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 MYL8P-204ENST00000431574 518 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 HMGB1P12-201ENST00000438594 598 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 AL359273.1-201ENST00000510918 627 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 RNU6-976P-201ENST00000516086 111 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 Y_RNA.670-201ENST00000516255 105 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 Y_RNA.708-201ENST00000516950 96 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 RN7SKP289-201ENST00000517244 295 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 AC069113.1-201ENST00000517763 267 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 IGKV2D-19-201ENST00000523346 262 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 CYCSP30-201ENST00000546447 172 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.03□□□□□ -1.76
ERCC4Q92889 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.03□□□□□ -1.76
ERCC4Q92889 AL157871.3-201ENST00000557231 293 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 AC034229.5-201ENST00000624258 185 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 AL512643.1-201ENST00000635735 524 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 AC068647.1-201ENST00000489539 2265 ntBASIC4.03□□□□□ -1.76
ERCC4Q92889 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.03□□□□□ -1.76
ERCC4Q92889 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC4Q92889 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.03□□□□□ -1.77
ERCC4Q92889 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ERCC4Q92889 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.02□□□□□ -1.77
ERCC4Q92889 RNU6-1329P-201ENST00000365664 107 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 Y_RNA.404-201ENST00000383978 102 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 U8.11-201ENST00000384699 133 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms