Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SNORA20.3-201ENST00000516880 132 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 RPL7P20-201ENST00000520308 745 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 MIR548S-201ENST00000581352 82 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 MIR3941-201ENST00000582572 103 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 BNIP3P25-201ENST00000596023 559 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 VN1R80P-201ENST00000597126 338 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 ATP5A1P2-202ENST00000616464 443 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 RMST_4.1-201ENST00000616886 107 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AL031601.2-202ENST00000622650 282 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 SRP72P2-201ENST00000344851 1979 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 MTND5P7-201ENST00000413558 1798 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 RNU6-384P-201ENST00000364900 104 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 RNU1-140P-201ENST00000365040 165 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 RNU6-198P-201ENST00000384258 104 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.623-201ENST00000411128 95 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 NDUFS5P4-201ENST00000412983 318 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 AL159169.1-201ENST00000421119 127 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 AC007560.1-201ENST00000426912 237 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 AC025750.2-201ENST00000442609 450 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 AL078601.1-201ENST00000444542 271 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 MTND4P18-201ENST00000447010 465 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 RPL37P4-201ENST00000448908 268 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 RNU7-170P-201ENST00000459303 61 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 AC011005.2-201ENST00000487324 359 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 RPS29P20-201ENST00000489592 171 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 RPS27AP10-201ENST00000496103 208 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 HIGD1AP13-201ENST00000509878 289 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 MIR892C-201ENST00000516410 77 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.28□□□□□ -1.88
HMGB4Q8WW32 MTND4LP5-201ENST00000605152 292 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 ATP1B3P1-201ENST00000605365 821 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 AC009033.1-201ENST00000624279 431 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 U6.99-201ENST00000637524 83 ntBASIC3.28□□□□□ -1.88
HMGB4Q8WW32 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 MAPK10-322ENST00000641485 4530 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 Y_RNA.100-201ENST00000363141 102 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 SNORD14B-201ENST00000364533 90 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RNU6-7-201ENST00000364784 107 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RNU6-8-201ENST00000365467 107 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 Y_RNA.373-201ENST00000365600 103 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 Z98749.2-208ENST00000381646 500 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 Y_RNA.480-201ENST00000384364 102 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 Y_RNA.510-201ENST00000384511 114 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RNU6-658P-201ENST00000384606 106 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 MIR591-201ENST00000385290 95 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RNU6-1148P-201ENST00000410992 104 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RPLP0P7-201ENST00000416050 667 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AL158071.1-201ENST00000430315 461 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AL627311.1-201ENST00000431514 115 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AL353572.1-201ENST00000442490 417 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RPL26P9-201ENST00000457466 433 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AC007547.1-201ENST00000462177 490 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AC083904.1-201ENST00000487828 231 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AC026801.1-201ENST00000497178 464 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AC025465.4-201ENST00000513422 638 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RNU6-1183P-201ENST00000517054 60 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RNU6-1314P-201ENST00000517139 104 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 CYCSP39-201ENST00000565821 309 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 MIR4513-201ENST00000581077 86 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RNVU1-4-201ENST00000612985 164 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AC018692.3-201ENST00000623929 123 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AL137790.1-201ENST00000634283 177 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 AC233263.6-201ENST00000631132 1963 ntBASIC3.27□□□□□ -1.89
HMGB4Q8WW32 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms