Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AL592148.1-201ENST00000413568 445 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 PTGES3P4-201ENST00000426243 356 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AL162395.1-201ENST00000457882 422 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC022364.2-201ENST00000457963 554 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC104806.1-201ENST00000508720 308 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC243972.3-201ENST00000539655 198 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC234778.2-201ENST00000566241 354 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC097065.2-201ENST00000608159 533 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC092656.1-203ENST00000624134 423 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 MIR7515-201ENST00000637837 67 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 AC093536.2-201ENST00000565257 1406 ntBASIC2.42□□□□□ -2.02
CCDC197Q8NCU1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 RNU6-371P-201ENST00000364283 108 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 RNU4-48P-201ENST00000365559 182 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 RNU6-550P-201ENST00000391057 101 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 RNA5SP111-201ENST00000411386 101 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 BTF3L4P1-201ENST00000413813 468 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 OR6C66P-201ENST00000414917 930 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 CALM2P2-201ENST00000428512 440 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AC000111.3-201ENST00000433478 193 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 RNU7-182P-201ENST00000459009 62 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AC091133.4-201ENST00000511142 308 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AC025449.1-201ENST00000603896 529 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AL670379.4-201ENST00000605279 254 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 SEPT14P19-203ENST00000633205 211 ntBASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC197Q8NCU1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC197Q8NCU1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC197Q8NCU1 SNORD14B-201ENST00000364533 90 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RNA5SP515-201ENST00000364570 118 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 SNORA18.3-201ENST00000384122 132 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RNU6-1103P-201ENST00000384150 107 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RNU6-606P-201ENST00000384721 111 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 Y_RNA.582-201ENST00000391023 95 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AL139039.1-201ENST00000401900 692 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 Y_RNA.625-201ENST00000411256 107 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 MTND1P23-201ENST00000416931 372 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 MTATP6P18-201ENST00000417994 673 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AL365338.1-201ENST00000422282 858 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 BTF3P15-201ENST00000455606 336 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RPS29P15-201ENST00000458329 171 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RPS29P26-201ENST00000477483 171 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AC104435.1-201ENST00000483483 166 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AC105313.1-201ENST00000509121 353 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 RNU6-405P-201ENST00000516637 110 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 IGLV3-17-201ENST00000519099 244 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AP000889.2-201ENST00000532684 490 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 MIR3160-1-201ENST00000577972 85 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AL391646.1-201ENST00000603860 190 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AL138889.2-201ENST00000603883 242 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 U6.114-201ENST00000636407 96 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 MTCO1P12-201ENST00000414273 1543 ntBASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC197Q8NCU1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC197Q8NCU1 AC004944.1-201ENST00000517807 3059 ntBASIC2.39□□□□□ -2.03
CCDC197Q8NCU1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms