Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC136619.2-201ENST00000563361 631 ntBASIC2.82□□□□□ -1.96
CCDC89Q8N998 AC009127.3-201ENST00000570531 403 ntBASIC2.82□□□□□ -1.96
CCDC89Q8N998 BNIP3P30-201ENST00000601184 574 ntBASIC2.82□□□□□ -1.96
CCDC89Q8N998 AL049779.4-201ENST00000604500 156 ntBASIC2.82□□□□□ -1.96
CCDC89Q8N998 AL162274.2-201ENST00000614406 332 ntBASIC2.82□□□□□ -1.96
CCDC89Q8N998 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC89Q8N998 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC89Q8N998 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC89Q8N998 RBBP8P1-201ENST00000449447 1844 ntBASIC2.82□□□□□ -1.96
CCDC89Q8N998 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 FGF7P2-201ENST00000332473 296 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 RNU6-371P-201ENST00000364283 108 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 RNU1-140P-201ENST00000365040 165 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 RNU6-487P-201ENST00000365430 104 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 EEF1A1P41-201ENST00000414667 207 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 RPL35AP12-201ENST00000425362 338 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 TOMM20P4-201ENST00000427861 435 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 AC119751.5-201ENST00000514077 770 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 AC118273.2-201ENST00000532092 465 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC89Q8N998 MIR1254-2-201ENST00000579553 63 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 AC021646.1-201ENST00000605469 484 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 MIR6798-201ENST00000612887 67 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 MIR8057-201ENST00000620957 69 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 AC010297.1-201ENST00000623948 149 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 U6.114-201ENST00000636407 96 ntBASIC2.81□□□□□ -1.96
CCDC89Q8N998 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC89Q8N998 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC89Q8N998 OR4G2P-201ENST00000328113 903 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 RNU6-1010P-201ENST00000362757 107 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 RNU1-72P-201ENST00000362976 153 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 SNORA3A-201ENST00000364113 130 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC89Q8N998 RN7SKP27-201ENST00000410684 333 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 RNU6-195P-201ENST00000411352 109 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC89Q8N998 RPL21P90-201ENST00000415692 466 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 MTND2P18-201ENST00000419962 1030 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AC092447.3-201ENST00000426027 686 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AL365400.1-201ENST00000431854 640 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 GPR143P-201ENST00000434155 205 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 CALM1P1-201ENST00000442082 433 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AC104058.1-201ENST00000448028 297 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC89Q8N998 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC89Q8N998 RPS29P26-201ENST00000477483 171 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AC109329.1-201ENST00000518744 317 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AP003072.2-201ENST00000527756 676 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AC093788.1-201ENST00000609356 927 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC89Q8N998 AC008121.3-201ENST00000618726 433 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 AC093648.1-201ENST00000623546 606 ntBASIC2.8□□□□□ -1.96
CCDC89Q8N998 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC89Q8N998 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CCDC89Q8N998 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC89Q8N998 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC89Q8N998 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC89Q8N998 RNU1-148P-201ENST00000384472 162 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 RNU1-57P-201ENST00000384491 166 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 Y_RNA.576-201ENST00000384781 102 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 RNA5SP171-201ENST00000391071 115 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 AL139039.1-201ENST00000401900 692 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 RAP1BP3-201ENST00000407180 549 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 EEF1A1P40-201ENST00000412883 573 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 UBE2V1P10-201ENST00000414685 269 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 MTCO3P5-201ENST00000433620 714 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 AL360271.2-201ENST00000447710 161 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC090525.1-201ENST00000479116 478 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC104806.1-201ENST00000508720 308 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC108043.1-201ENST00000512696 574 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 RPL7P20-201ENST00000520308 745 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 CYCSP26-201ENST00000534107 320 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC022080.3-201ENST00000544433 482 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 MIR3944-201ENST00000581277 108 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC073410.2-201ENST00000603240 332 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 MIR98-201ENST00000606724 119 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 AL161423.1-201ENST00000613700 262 ntBASIC2.79□□□□□ -1.96
CCDC89Q8N998 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 AL359740.1-201ENST00000624340 592 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms