Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL161729.4-201ENST00000604650 476 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS8Q8N3P4 AC009233.1-201ENST00000616477 371 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 AL391597.1-201ENST00000618707 694 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
VPS8Q8N3P4 AL359854.1-201ENST00000614203 1594 ntBASIC0.79□□□□□ -2.28
VPS8Q8N3P4 RNA5SP457-201ENST00000363657 124 ntBASIC0.79□□□□□ -2.28
VPS8Q8N3P4 RNU2-36P-201ENST00000410361 191 ntBASIC0.79□□□□□ -2.28
VPS8Q8N3P4 NDUFB4P7-201ENST00000423198 363 ntBASIC0.79□□□□□ -2.28
VPS8Q8N3P4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS8Q8N3P4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.79□□□□□ -2.28
VPS8Q8N3P4 AC024581.2-201ENST00000619986 252 ntBASIC0.79□□□□□ -2.28
VPS8Q8N3P4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VPS8Q8N3P4 AL118508.4-201ENST00000624142 1176 ntBASIC0.79□□□□□ -2.28
VPS8Q8N3P4 AL109659.3-201ENST00000624985 950 ntBASIC0.79□□□□□ -2.28
VPS8Q8N3P4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 SNORA25B-201ENST00000365507 128 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 RNU11-3P-201ENST00000391111 133 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 BTF3P8-201ENST00000414577 526 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 HMGN3P1-201ENST00000453847 193 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 RNU5A-7P-201ENST00000515979 116 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 RNU6-27P-201ENST00000516146 107 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AC005832.3-201ENST00000537929 631 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AC021739.1-201ENST00000559631 174 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AC004492.1-201ENST00000607036 742 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AC009229.3-201ENST00000608056 282 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AC021851.1-201ENST00000608537 1082 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
VPS8Q8N3P4 MIR6130-201ENST00000619419 109 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AC243829.3-201ENST00000622177 108 ntBASIC0.78□□□□□ -2.28
VPS8Q8N3P4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
VPS8Q8N3P4 RNU5A-1-201ENST00000362698 116 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 SNORD82-201ENST00000365530 70 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 RNU6-26P-201ENST00000383985 107 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 RNU6-444P-201ENST00000383988 108 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 RNU6-217P-201ENST00000384164 104 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 MTCO2P20-201ENST00000437339 673 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 JTBP1-201ENST00000441314 247 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 AL161788.1-201ENST00000441805 169 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS8Q8N3P4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS8Q8N3P4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS8Q8N3P4 AC008127.2-201ENST00000549925 1075 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 AL022067.1-201ENST00000602426 454 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 AL391813.1-201ENST00000603098 260 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 AC106800.4-201ENST00000614905 153 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 MTND5P11-201ENST00000511037 1812 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 ZNF680P1-201ENST00000436625 1469 ntBASIC0.77□□□□□ -2.29
VPS8Q8N3P4 RNU5E-1-201ENST00000362477 120 ntBASIC0.76□□□□□ -2.29
VPS8Q8N3P4 RNU6-233P-201ENST00000410845 141 ntBASIC0.76□□□□□ -2.29
VPS8Q8N3P4 MTCO1P53-201ENST00000441633 699 ntBASIC0.76□□□□□ -2.29
VPS8Q8N3P4 RNA5SP404-201ENST00000517118 132 ntBASIC0.76□□□□□ -2.29
VPS8Q8N3P4 OR8K4P-201ENST00000534608 872 ntBASIC0.76□□□□□ -2.29
VPS8Q8N3P4 AC002400.1-201ENST00000569310 726 ntBASIC0.76□□□□□ -2.29
VPS8Q8N3P4 SNORD115-3-201ENST00000363100 82 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 RNU6-271P-201ENST00000363858 105 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 AL139098.1-201ENST00000407291 389 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 RPL30P7-201ENST00000479312 323 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 AP006587.4-201ENST00000526053 529 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 AC124947.2-202ENST00000552735 133 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS8Q8N3P4 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 SNRPGP17-201ENST00000603780 214 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 uc_338.14-201ENST00000613162 166 ntBASIC0.75□□□□□ -2.29
VPS8Q8N3P4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
VPS8Q8N3P4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS8Q8N3P4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
VPS8Q8N3P4 RPL23AP32-201ENST00000395315 459 ntBASIC0.74□□□□□ -2.29
VPS8Q8N3P4 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
VPS8Q8N3P4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.74□□□□□ -2.29
VPS8Q8N3P4 AC108729.1-201ENST00000487812 947 ntBASIC0.74□□□□□ -2.29
VPS8Q8N3P4 RPL22P13-201ENST00000493291 347 ntBASIC0.74□□□□□ -2.29
VPS8Q8N3P4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS8Q8N3P4 SNORD116-30-201ENST00000516468 85 ntBASIC0.74□□□□□ -2.29
VPS8Q8N3P4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS8Q8N3P4 LSM6P2-201ENST00000552208 177 ntBASIC0.74□□□□□ -2.29
VPS8Q8N3P4 AC004775.1-201ENST00000607389 753 ntBASIC0.74□□□□□ -2.29
VPS8Q8N3P4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS8Q8N3P4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 MIR649-201ENST00000384843 97 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS8Q8N3P4 USP9YP26-201ENST00000421008 661 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 USP9YP18-201ENST00000425912 695 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 ZNF965P-201ENST00000432501 817 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 USP9YP24-201ENST00000434374 697 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.73□□□□□ -2.29
VPS8Q8N3P4 USP9YP17-201ENST00000444617 696 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 AL133373.1-201ENST00000497098 94 ntBASIC0.73□□□□□ -2.29
VPS8Q8N3P4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.73□□□□□ -2.29
VPS8Q8N3P4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.73□□□□□ -2.29
VPS8Q8N3P4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS8Q8N3P4 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms