Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.51□□□□□ -1.85
KRT78Q8N1N4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.51□□□□□ -1.85
KRT78Q8N1N4 AC002044.1-201ENST00000606707 158 ntBASIC3.51□□□□□ -1.85
KRT78Q8N1N4 RMST_4.1-201ENST00000616886 107 ntBASIC3.51□□□□□ -1.85
KRT78Q8N1N4 AL731566.2-201ENST00000618971 317 ntBASIC3.51□□□□□ -1.85
KRT78Q8N1N4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.51□□□□□ -1.85
KRT78Q8N1N4 AC090617.10-201ENST00000624308 134 ntBASIC3.51□□□□□ -1.85
KRT78Q8N1N4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.51□□□□□ -1.85
KRT78Q8N1N4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRT78Q8N1N4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRT78Q8N1N4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRT78Q8N1N4 AC010680.1-201ENST00000590024 3590 ntBASIC3.51□□□□□ -1.85
KRT78Q8N1N4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.51□□□□□ -1.85
KRT78Q8N1N4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 SNORA63C-201ENST00000364578 129 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 RNA5SP479-201ENST00000364858 117 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 Y_RNA.530-201ENST00000384587 101 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 RNU6-277P-201ENST00000516272 106 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 BTF3P12-201ENST00000519620 469 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 AC023050.3-201ENST00000541142 333 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 CYCSP39-201ENST00000565821 309 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 AL451007.1-201ENST00000595491 289 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 NUTF2P8-201ENST00000604593 363 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 RMST_7.1-201ENST00000621935 268 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 AC138305.3-201ENST00000624988 240 ntBASIC3.5□□□□□ -1.85
KRT78Q8N1N4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.5□□□□□ -1.85
KRT78Q8N1N4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 Y_RNA.166-201ENST00000363730 102 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 Y_RNA.216-201ENST00000364205 93 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 RNA5SP139-201ENST00000364340 117 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 RNU6-522P-201ENST00000364497 107 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 RNU6-898P-201ENST00000365627 104 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 Y_RNA.431-201ENST00000384086 102 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AL391417.1-201ENST00000404100 426 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AL445189.1-201ENST00000405722 338 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AL365400.1-201ENST00000431854 640 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AC098831.1-201ENST00000440661 216 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 RPL7P12-201ENST00000446719 750 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 RPS3AP46-201ENST00000448352 682 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 RNU6-1314P-201ENST00000517139 104 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AC022634.1-201ENST00000520765 532 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 AC006077.1-201ENST00000604746 343 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 MFSD8-236ENST00000641509 4050 ntBASIC3.49□□□□□ -1.85
KRT78Q8N1N4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT78Q8N1N4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC121333.1-201ENST00000567488 2709 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 SNORD113-7-201ENST00000363762 77 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RNU2-3P-201ENST00000410144 191 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RPS15AP6-201ENST00000420703 385 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RPL35AP12-201ENST00000425362 338 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC006026.2-201ENST00000457376 180 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 snoU109.2-201ENST00000459316 135 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC103851.1-201ENST00000506833 274 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC113155.1-201ENST00000511141 769 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RNU2-27P-201ENST00000516185 142 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RNU6-323P-201ENST00000521915 107 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AL355877.2-201ENST00000603670 358 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AC124312.5-201ENST00000604451 268 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.48□□□□□ -1.85
KRT78Q8N1N4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.48□□□□□ -1.85
KRT78Q8N1N4 AP003355.3-201ENST00000623465 114 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms