Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC016691.1-201ENST00000441321 413 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC008716.1-201ENST00000511084 513 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC011352.1-201ENST00000512300 793 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 RNU6-572P-201ENST00000516724 80 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 SUB1P1-201ENST00000524415 382 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 TRAV37-201ENST00000553906 342 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AL157687.1-201ENST00000554853 619 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 TPRKBP2-201ENST00000565969 475 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AL162413.1-201ENST00000603198 110 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC093788.1-201ENST00000609356 927 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 SNORA50A-202ENST00000629536 136 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC110491.1-201ENST00000562191 2010 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC091564.4-201ENST00000533934 2194 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 ELF2P3-201ENST00000445099 1506 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AL139276.1-201ENST00000311910 1001 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 RNU6-552P-201ENST00000362869 119 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 SNORD56.3-201ENST00000363507 71 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 CD24P4-201ENST00000382840 243 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 MIR767-201ENST00000390228 109 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 RNU6-903P-201ENST00000391270 109 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AL356057.2-201ENST00000403318 432 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 TOMM20P4-201ENST00000427861 435 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AL078601.1-201ENST00000444542 271 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 FDX1P2-201ENST00000450769 375 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC083906.5-201ENST00000503722 328 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC092436.1-201ENST00000506450 503 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 MIR4435-1-201ENST00000582552 80 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 HMGN2P15-201ENST00000585707 270 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC005498.1-201ENST00000592125 465 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AL645944.1-201ENST00000603857 493 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AC068944.2-201ENST00000610373 403 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 AL160394.1-201ENST00000624765 724 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.31□□□□□ -1.88
HERC6Q8IVU3 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
HERC6Q8IVU3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 SNORA69-201ENST00000383895 132 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 Y_RNA.402-201ENST00000383972 102 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AL606923.1-201ENST00000406616 190 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 RPL21P90-201ENST00000415692 466 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 USP9YP27-201ENST00000418455 438 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 BPY2DP-201ENST00000422208 265 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 MTCYBP8-201ENST00000422855 651 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 SKA2P1-201ENST00000425592 390 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 SEPT14P3-201ENST00000439401 183 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AC098831.1-201ENST00000440661 216 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AL732372.2-207ENST00000445840 183 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AC073415.1-201ENST00000449240 153 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AL109933.2-201ENST00000452651 260 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 SEPT14P2-201ENST00000453405 183 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 RPS27AP10-201ENST00000496103 208 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 MTND4LP22-201ENST00000508209 276 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 SEPT14P4-201ENST00000513445 186 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 RNU6-1281P-201ENST00000516223 105 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 RNU6-1178P-201ENST00000516674 107 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 SNORA31.19-201ENST00000517079 126 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 FO082796.1-201ENST00000523795 183 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 OR5AQ1P-201ENST00000527596 927 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 LINC00933-203ENST00000559812 219 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms