Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC009296.1-201ENST00000443146 155 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 SNRPFP4-201ENST00000456366 242 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.89□□□□□ -1.95
NPHP3Q7Z494 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.89□□□□□ -1.95
NPHP3Q7Z494 RNA5SP182-201ENST00000516064 82 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 RNA5SP337-201ENST00000517007 109 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 GNAI2P1-201ENST00000541815 315 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.89□□□□□ -1.95
NPHP3Q7Z494 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.89□□□□□ -1.95
NPHP3Q7Z494 SNHG22-203ENST00000617833 660 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 UCA1.1-201ENST00000620952 75 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 MTND1P37-201ENST00000636562 264 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
NPHP3Q7Z494 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 Y_RNA.201-201ENST00000364052 96 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 RNU6-348P-201ENST00000384386 107 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 RNU6-140P-201ENST00000384566 108 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 SNORA17.3-201ENST00000391159 129 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC019129.1-201ENST00000403786 261 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 RNU6-193P-201ENST00000410977 107 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AL353729.1-201ENST00000425044 720 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC093106.2-201ENST00000428212 385 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 USP12PX-201ENST00000432383 1057 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 Z96811.1-201ENST00000445880 108 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 MTND1P29-201ENST00000448112 647 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 snoU109.1-201ENST00000459339 135 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC087588.1-201ENST00000462203 316 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC093012.1-202ENST00000549403 582 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 MIR3913-1-201ENST00000577744 102 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AP001506.1-201ENST00000615444 211 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC108479.2-201ENST00000617314 601 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AC009509.4-201ENST00000619202 509 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 AL160394.1-201ENST00000624765 724 ntBASIC2.88□□□□□ -1.95
NPHP3Q7Z494 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
NPHP3Q7Z494 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 OR5H15-201ENST00000383696 930 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 RNU2-62P-201ENST00000410868 191 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC119618.1-201ENST00000434191 222 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC009961.2-201ENST00000435771 251 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AL353706.1-201ENST00000436728 494 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 KATNBL1P3-201ENST00000443475 909 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC244505.5-201ENST00000443639 207 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 UBBP3-201ENST00000445497 241 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 ARL2BPP4-201ENST00000506854 471 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 MTCO3P28-201ENST00000513351 515 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 SNORA18.6-201ENST00000516792 115 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 RNU6-1220P-201ENST00000517126 108 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AL391261.3-201ENST00000557194 520 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 AC090578.1-201ENST00000604955 591 ntBASIC2.87□□□□□ -1.95
NPHP3Q7Z494 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.87□□□□□ -1.95
NPHP3Q7Z494 ZNF271P-202ENST00000465539 1970 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 Z82195.2-201ENST00000612348 18351 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 RNU6-511P-201ENST00000363496 107 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 RNU6-701P-201ENST00000384059 107 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 RPL23AP32-201ENST00000395315 459 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 DEFB108C-201ENST00000400154 252 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC127391.1-201ENST00000411737 98 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 BX295541.1-201ENST00000417774 250 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC006366.1-201ENST00000422002 759 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 CR769767.1-201ENST00000436337 346 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 USP9YP15-201ENST00000442391 422 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC020550.1-201ENST00000447385 163 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 MTND1P27-201ENST00000451117 902 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 MTND1P12-201ENST00000455231 147 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 RPL12P25-201ENST00000455592 494 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC079140.3-201ENST00000511111 550 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 RNA5SP402-201ENST00000517148 110 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms