Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AC092325.1-201ENST00000566449 554 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 MIR4446-201ENST00000578505 67 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 MIR548AB-201ENST00000584917 84 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 BNIP3P8-201ENST00000597863 560 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AC012065.4-201ENST00000602445 679 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AC006023.1-201ENST00000603944 259 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AC007621.1-201ENST00000604544 437 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AL451064.1-201ENST00000607718 471 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 RNU6-91P-201ENST00000607774 107 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.21□□□□□ -2.06
NIPAL3Q6P499 U4.3-201ENST00000621047 82 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 FO624990.1-201ENST00000636373 85 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AC007336.1-201ENST00000576365 3828 ntBASIC2.21□□□□□ -2.06
NIPAL3Q6P499 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
NIPAL3Q6P499 AC103710.2-202ENST00000641454 2853 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 SNORA20.2-201ENST00000383922 131 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 SNORA75B-201ENST00000384053 137 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 SNORA41-201ENST00000384675 132 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 MIR23A-201ENST00000385245 73 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 CISD1P1-201ENST00000393907 327 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 FTH1P15-201ENST00000406984 280 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 NPM1P11-201ENST00000417106 855 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC016831.2-201ENST00000417179 352 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AL365338.1-201ENST00000422282 858 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AL365203.2-201ENST00000423444 196 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AL160275.3-201ENST00000423876 471 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC012308.1-201ENST00000451232 178 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 MRPL42P6-201ENST00000486397 371 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC109486.1-201ENST00000486833 374 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AF213884.2-201ENST00000510417 903 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.2□□□□□ -2.06
NIPAL3Q6P499 RNU4-29P-201ENST00000515943 174 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 RNU5B-3P-201ENST00000516601 115 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 OR5AQ1P-201ENST00000527596 927 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC079598.5-201ENST00000547460 117 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AL138963.2-201ENST00000605137 226 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 SNORD14A-201ENST00000606526 91 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 U6.42-201ENST00000618440 107 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 AC092656.1-203ENST00000624134 423 ntBASIC2.2□□□□□ -2.06
NIPAL3Q6P499 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NIPAL3Q6P499 OR56A5-201ENST00000340110 738 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 RNU1-138P-201ENST00000384093 164 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 SNORA24.1-201ENST00000384401 135 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 Y_RNA.510-201ENST00000384511 114 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 CIR1P3-201ENST00000405137 479 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 RNU4-72P-201ENST00000410754 173 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC127391.1-201ENST00000411737 98 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC005005.2-201ENST00000420779 380 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 Z82209.1-201ENST00000422141 2135 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 RPL7P34-201ENST00000433316 712 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AL133217.1-201ENST00000450980 425 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 RPS3P1-201ENST00000456781 192 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 KLF3P2-201ENST00000465138 268 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC022493.1-201ENST00000492984 337 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.19□□□□□ -2.06
NIPAL3Q6P499 MTCYBP35-201ENST00000503630 1137 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC008526.1-201ENST00000509149 338 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC118465.1-201ENST00000513820 1271 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC022616.3-201ENST00000523940 148 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 FAM92A1P1-201ENST00000528023 890 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
NIPAL3Q6P499 CBX3P7-201ENST00000532876 502 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC087241.2-201ENST00000535801 324 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC025678.1-201ENST00000567861 338 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 MIR548AC-201ENST00000585049 88 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC005771.1-201ENST00000585581 349 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 DEFB131E-202ENST00000602581 683 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC026790.2-201ENST00000606282 430 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC096772.1-201ENST00000609146 564 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AL133173.2-201ENST00000614270 90 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC108479.2-201ENST00000617314 601 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 AC091304.6-201ENST00000619761 202 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 MIR5739-201ENST00000619803 80 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
NIPAL3Q6P499 HSPA8P4-201ENST00000511877 1920 ntBASIC2.19□□□□□ -2.06
NIPAL3Q6P499 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NIPAL3Q6P499 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 RNU1-51P-201ENST00000365345 176 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 RNA5SP240-201ENST00000365355 128 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 U3.37-201ENST00000408528 213 ntBASIC2.18□□□□□ -2.06
NIPAL3Q6P499 RN7SKP158-201ENST00000410453 326 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms