Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AC022432.1-201ENST00000595739 310 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AC073539.2-201ENST00000597113 165 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 NUTF2P8-201ENST00000604593 363 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AC069200.1-201ENST00000609511 323 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 ATP5A1P2-202ENST00000616464 443 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC178Q5BJE1 RNU6-266P-201ENST00000364225 107 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 RNU6-1179P-201ENST00000384667 107 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 RNA5SP44-201ENST00000410446 133 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 MTND1P17-201ENST00000448961 204 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 RPL21P13-201ENST00000488305 481 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 RNU6-1213P-201ENST00000517075 94 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 AC093331.1-201ENST00000521474 169 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 IGHV3-76-201ENST00000522465 295 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 AC106900.2-201ENST00000604994 317 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 AC107294.1-201ENST00000609524 467 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 PART1_1.1-201ENST00000611761 217 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 AL021368.2-201ENST00000606125 5352 ntBASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC178Q5BJE1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 RNU6-371P-201ENST00000364283 108 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 RNA5SP267-201ENST00000364893 126 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 U3.19-201ENST00000390893 196 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AL158156.1-201ENST00000422509 473 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 SKA2P1-201ENST00000425592 390 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 SNAP23P1-201ENST00000433229 246 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 MTCYBP6-201ENST00000441810 138 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 RPS4XP2-201ENST00000458402 793 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC130509.1-201ENST00000464158 433 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC034236.1-201ENST00000469891 373 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 RPL7P49-201ENST00000471402 708 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 HMGN1P10-201ENST00000474557 553 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 HMGB3P15-201ENST00000507326 574 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 SNORA31.8-201ENST00000516327 108 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 CYCSP27-201ENST00000527643 293 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC074050.1-201ENST00000563247 211 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AL161798.1-201ENST00000604630 131 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC124303.1-201ENST00000605703 360 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 AC010378.1-201ENST00000619270 362 ntBASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC178Q5BJE1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.216-201ENST00000364205 93 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 SNORA7.2-201ENST00000364446 145 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 MIR548P-201ENST00000408336 84 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 RPL23AP82-202ENST00000427528 469 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 AL360271.2-201ENST00000447710 161 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.653-201ENST00000459091 95 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 AC008155.2-201ENST00000464337 397 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 RN7SL601P-201ENST00000471221 293 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 IMMP1LP2-201ENST00000552954 492 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms