Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CALM1P1-201ENST00000442082 433 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 RN7SL297P-201ENST00000483161 293 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC074344.1-201ENST00000512823 224 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 RNA5SP401-201ENST00000515920 127 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 RN7SKP219-201ENST00000516825 296 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 OR5B19P-201ENST00000531766 928 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC130324.3-201ENST00000614165 542 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 DUXAP9-208ENST00000622815 614 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC011155.2-201ENST00000623202 216 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC025034.2-201ENST00000623264 286 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 CTSLP2-204ENST00000629029 392 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC099654.14-201ENST00000638599 341 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 RNA5SP126-201ENST00000365092 109 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 SNORD115-7-201ENST00000365306 82 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 MIR514A1-201ENST00000385133 98 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AL354719.1-201ENST00000406535 843 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 RNU6-387P-201ENST00000411331 105 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AC073415.1-201ENST00000449240 153 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 HMGN2P16-201ENST00000456802 261 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AC233702.1-201ENST00000482905 502 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AL359273.1-201ENST00000510918 627 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AP005435.4-201ENST00000529514 284 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 OR5AL2P-201ENST00000532185 920 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AP001029.3-201ENST00000588063 596 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 BNIP3P30-201ENST00000601184 574 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AC104763.2-201ENST00000604179 382 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 DISC2.1-201ENST00000612827 205 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 U4.3-201ENST00000621047 82 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 AL589994.2-201ENST00000621124 579 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 IGHVIII-44-202ENST00000636235 289 ntBASIC3.11□□□□□ -1.91
PDS5AQ29RF7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.11□□□□□ -1.91
PDS5AQ29RF7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDS5AQ29RF7 RNU6-451P-201ENST00000362921 107 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 RNU2-29P-201ENST00000410423 189 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 Y_RNA.604-201ENST00000410574 102 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 RNU2-71P-201ENST00000411395 189 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AL513331.1-201ENST00000411908 397 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AC009963.1-201ENST00000417265 157 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AL451054.2-201ENST00000420896 202 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AL139413.1-201ENST00000421309 217 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.1□□□□□ -1.91
PDS5AQ29RF7 NEFMP1-201ENST00000443423 1006 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 MTND1P18-201ENST00000448191 573 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 GSTA11P-201ENST00000452866 669 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AC092436.1-201ENST00000506450 503 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AC010486.1-201ENST00000511793 424 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 SNORD60.2-201ENST00000516883 86 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AL138976.2-201ENST00000563989 694 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AP002826.1-201ENST00000608835 315 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AC006023.2-201ENST00000609916 167 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 U6.42-201ENST00000618440 107 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AC024940.5-201ENST00000622889 474 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.1□□□□□ -1.91
PDS5AQ29RF7 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.1□□□□□ -1.91
PDS5AQ29RF7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.1□□□□□ -1.91
PDS5AQ29RF7 U6.114-201ENST00000636407 96 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 AC024614.3-201ENST00000637860 256 ntBASIC3.1□□□□□ -1.91
PDS5AQ29RF7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
PDS5AQ29RF7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PDS5AQ29RF7 AC016717.2-201ENST00000609089 5141 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PDS5AQ29RF7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
PDS5AQ29RF7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDS5AQ29RF7 RNU6-1029P-201ENST00000384109 107 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PDS5AQ29RF7 RNU6-903P-201ENST00000391270 109 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 AP000567.1-201ENST00000406413 156 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.09□□□□□ -1.91
PDS5AQ29RF7 MTCYBP8-201ENST00000422855 651 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 RPL27AP8-201ENST00000424277 446 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 RPL7L1P10-201ENST00000427790 463 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 HMGB1P12-201ENST00000438594 598 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 MRPL50P4-201ENST00000446432 475 ntBASIC3.09□□□□□ -1.91
PDS5AQ29RF7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms