Protein–RNA interactions for Protein: Q15843

NEDD8, NEDD8, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8Q15843 RPS15AP9-201ENST00000439856 381 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 MTATP6P30-201ENST00000443540 664 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 GXYLT1P1-201ENST00000446657 490 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 AC020550.1-201ENST00000447385 163 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.83□□□□□ -2.28
NEDD8Q15843 MTND1P9-201ENST00000453775 944 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 RPS26P55-201ENST00000471178 356 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 AL121594.1-201ENST00000475906 575 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.83□□□□□ -2.28
NEDD8Q15843 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.83□□□□□ -2.28
NEDD8Q15843 AC010486.1-201ENST00000511793 424 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.83□□□□□ -2.28
NEDD8Q15843 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
NEDD8Q15843 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.83□□□□□ -2.28
NEDD8Q15843 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.83□□□□□ -2.28
NEDD8Q15843 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.83□□□□□ -2.28
NEDD8Q15843 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
NEDD8Q15843 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
NEDD8Q15843 MIR4513-201ENST00000581077 86 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 AL355802.3-201ENST00000607571 545 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 AC009237.15-201ENST00000610252 501 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 uc_338.12-201ENST00000616344 181 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 AL132822.1-201ENST00000617063 513 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 MIR6134-201ENST00000617606 109 ntBASIC0.83□□□□□ -2.28
NEDD8Q15843 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.83□□□□□ -2.28
NEDD8Q15843 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.83□□□□□ -2.28
NEDD8Q15843 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.83□□□□□ -2.28
NEDD8Q15843 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.82□□□□□ -2.28
NEDD8Q15843 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
NEDD8Q15843 RNU6-188P-201ENST00000364207 107 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.82□□□□□ -2.28
NEDD8Q15843 RNU6-439P-201ENST00000384188 106 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.82□□□□□ -2.28
NEDD8Q15843 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.82□□□□□ -2.28
NEDD8Q15843 CR769776.1-201ENST00000441254 787 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.82□□□□□ -2.28
NEDD8Q15843 AL441985.1-201ENST00000457727 251 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 MEMO1P3-201ENST00000459811 302 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC109927.2-201ENST00000506416 303 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.82□□□□□ -2.28
NEDD8Q15843 MTND5P13-201ENST00000513046 1079 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 RNU5B-3P-201ENST00000516601 115 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 ACA59.2-201ENST00000517061 156 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 SNORA76.2-201ENST00000517095 137 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AP005660.1-201ENST00000522972 293 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.82□□□□□ -2.28
NEDD8Q15843 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.82□□□□□ -2.28
NEDD8Q15843 AC138915.2-201ENST00000569776 97 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC098826.3-201ENST00000603823 466 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 KATNBL1P5-201ENST00000605015 517 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 RNU6-91P-201ENST00000607774 107 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC097468.3-201ENST00000607956 456 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC013470.4-201ENST00000619978 986 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AL445264.1-201ENST00000621719 171 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC009268.2-201ENST00000621925 457 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 AC017037.3-201ENST00000625016 472 ntBASIC0.82□□□□□ -2.28
NEDD8Q15843 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 MIR302D-201ENST00000362275 68 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 Y_RNA.25-201ENST00000362528 102 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 MIR1302-8-201ENST00000408342 128 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 RN7SKP284-201ENST00000411002 343 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 MTND1P21-201ENST00000412991 285 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 TPMTP2-201ENST00000414372 726 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 BTF3L4P3-201ENST00000418879 476 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 USP9YP26-201ENST00000421008 661 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.81□□□□□ -2.28
NEDD8Q15843 AC245102.2-201ENST00000448956 180 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
NEDD8Q15843 OR6C5P-201ENST00000452388 923 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.81□□□□□ -2.28
NEDD8Q15843 PRELID3BP1-201ENST00000457142 540 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 snoU13.8-201ENST00000458890 104 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 TRBV12-1-201ENST00000479785 344 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.81□□□□□ -2.28
NEDD8Q15843 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.81□□□□□ -2.28
NEDD8Q15843 MTCYBP16-201ENST00000509187 1129 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AC117522.2-201ENST00000510049 657 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.81□□□□□ -2.28
NEDD8Q15843 AC108043.1-201ENST00000512696 574 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.81□□□□□ -2.28
NEDD8Q15843 AC117532.1-201ENST00000514638 323 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 RNU6-1183P-201ENST00000517054 60 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AC006518.2-201ENST00000542513 940 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.81□□□□□ -2.28
NEDD8Q15843 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
NEDD8Q15843 AL357080.1-201ENST00000617394 239 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.81□□□□□ -2.28
NEDD8Q15843 AC120349.2-201ENST00000625002 298 ntBASIC0.81□□□□□ -2.28
NEDD8Q15843 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.81□□□□□ -2.28
NEDD8Q15843 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.81□□□□□ -2.28
NEDD8Q15843 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
NEDD8Q15843 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
NEDD8Q15843 RNU1-58P-201ENST00000362413 163 ntBASIC0.8□□□□□ -2.28
NEDD8Q15843 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
NEDD8Q15843 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
NEDD8Q15843 SNORA70B-201ENST00000384210 135 ntBASIC0.8□□□□□ -2.28
NEDD8Q15843 RNU6-611P-201ENST00000384276 104 ntBASIC0.8□□□□□ -2.28
NEDD8Q15843 SNORD14D-201ENST00000384390 87 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms