Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SF3A2Q15428 RNU6-1129P-201ENST00000515964 104 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 AP000889.2-201ENST00000532684 490 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 AC007834.2-201ENST00000536310 343 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 AC006199.1-201ENST00000548728 219 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.08□□□□□ -2.08
SF3A2Q15428 AC021739.1-201ENST00000559631 174 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 AC136618.2-201ENST00000575091 400 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.08□□□□□ -2.08
SF3A2Q15428 AC073544.2-201ENST00000601155 540 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.08□□□□□ -2.08
SF3A2Q15428 AC005332.10-201ENST00000612725 619 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.08□□□□□ -2.08
SF3A2Q15428 AC078883.4-201ENST00000623218 367 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.08□□□□□ -2.08
SF3A2Q15428 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SF3A2Q15428 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 MIR337-201ENST00000362281 93 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 RNU6-769P-201ENST00000384407 104 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 RNU6-321P-201ENST00000410912 106 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 RNU6-920P-201ENST00000410926 92 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 HMGB1P11-201ENST00000413899 637 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 CYCSP48-201ENST00000417124 323 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 MTND2P18-201ENST00000419962 1030 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.07□□□□□ -2.08
SF3A2Q15428 ISCA1P1-201ENST00000426679 387 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 TAF9P1-201ENST00000445421 515 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 HMGN2P10-201ENST00000448085 265 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AL133217.1-201ENST00000450980 425 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 TAF9P2-201ENST00000454958 515 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 RPL37P6-201ENST00000460682 294 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 RPL36AP21-201ENST00000490372 323 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC139453.3-201ENST00000493276 369 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SF3A2Q15428 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.07□□□□□ -2.08
SF3A2Q15428 SCARNA3-201ENST00000517097 143 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.07□□□□□ -2.08
SF3A2Q15428 AP000907.2-201ENST00000530827 353 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AP004247.1-201ENST00000531556 1289 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.07□□□□□ -2.08
SF3A2Q15428 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.07□□□□□ -2.08
SF3A2Q15428 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.07□□□□□ -2.08
SF3A2Q15428 AC009127.3-201ENST00000570531 403 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 MIR5571-201ENST00000577998 113 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 MIR3167-201ENST00000579623 85 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC008088.1-201ENST00000580993 280 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.07□□□□□ -2.08
SF3A2Q15428 MIR4999-201ENST00000585029 91 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.07□□□□□ -2.08
SF3A2Q15428 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.07□□□□□ -2.08
SF3A2Q15428 RPS15AP11-201ENST00000594193 385 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC068790.3-201ENST00000602988 553 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC018638.7-201ENST00000605836 1114 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.07□□□□□ -2.08
SF3A2Q15428 AL360219.1-201ENST00000610230 366 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC025594.3-201ENST00000613068 790 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC010678.1-201ENST00000614118 713 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
SF3A2Q15428 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.07□□□□□ -2.08
SF3A2Q15428 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SF3A2Q15428 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SF3A2Q15428 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SF3A2Q15428 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SF3A2Q15428 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
SF3A2Q15428 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SF3A2Q15428 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.06□□□□□ -2.08
SF3A2Q15428 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SF3A2Q15428 Y_RNA.302-201ENST00000364997 102 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.06□□□□□ -2.08
SF3A2Q15428 SNORD116-8-201ENST00000384365 95 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 AL021407.1-201ENST00000404531 386 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 MIR1305-201ENST00000408300 86 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 RNU4-72P-201ENST00000410754 173 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 AC078974.1-201ENST00000411597 223 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.06□□□□□ -2.08
SF3A2Q15428 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.06□□□□□ -2.08
SF3A2Q15428 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.06□□□□□ -2.08
SF3A2Q15428 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.06□□□□□ -2.08
SF3A2Q15428 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.06□□□□□ -2.08
SF3A2Q15428 AC104651.1-201ENST00000427559 735 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 RPL30P4-201ENST00000429309 333 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 MICF-203ENST00000432679 129 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.06□□□□□ -2.08
SF3A2Q15428 AL354941.1-201ENST00000438600 464 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.06□□□□□ -2.08
SF3A2Q15428 AL161651.1-201ENST00000440882 223 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 MTND2P22-201ENST00000444325 1033 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.06□□□□□ -2.08
SF3A2Q15428 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.06□□□□□ -2.08
SF3A2Q15428 MTATP6P7-201ENST00000453315 681 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 KLF3P2-201ENST00000465138 268 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 RPF2P2-201ENST00000504693 896 ntBASIC2.06□□□□□ -2.08
SF3A2Q15428 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms