Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.13□□□□□ -2.07
RAB40BQ12829 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.12□□□□□ -2.07
RAB40BQ12829 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RAB40BQ12829 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
RAB40BQ12829 CKAP2P1-201ENST00000555477 2049 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 SNORA5B-201ENST00000363786 132 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 SNORA38-201ENST00000363946 132 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB40BQ12829 NPM1P11-201ENST00000417106 855 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 MTND2P18-201ENST00000419962 1030 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AL160275.3-201ENST00000423876 471 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AC073614.1-201ENST00000438690 650 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 RPS15AP9-201ENST00000439856 381 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AP000936.2-201ENST00000447151 681 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AL136380.1-201ENST00000447970 162 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 EEF1B2P7-201ENST00000451177 676 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AL033528.1-201ENST00000453780 140 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 SNRPGP9-201ENST00000456025 225 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AC080013.2-201ENST00000460866 323 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AP001486.1-201ENST00000463339 476 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AP000852.1-201ENST00000472460 573 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 MTND3P7-201ENST00000474435 343 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AC011005.2-201ENST00000487324 359 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 RPL22P13-201ENST00000493291 347 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB40BQ12829 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.12□□□□□ -2.07
RAB40BQ12829 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.12□□□□□ -2.07
RAB40BQ12829 SNORA25.11-201ENST00000515935 105 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 SCARNA24.1-201ENST00000516465 137 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AC105137.2-201ENST00000569073 466 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 MIR5571-201ENST00000577998 113 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 DEFB131E-202ENST00000602581 683 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.12□□□□□ -2.07
RAB40BQ12829 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.12□□□□□ -2.07
RAB40BQ12829 AL157786.1-207ENST00000627771 695 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RAB40BQ12829 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RAB40BQ12829 AC069528.2-201ENST00000624849 1991 ntBASIC2.12□□□□□ -2.07
RAB40BQ12829 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RAB40BQ12829 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
RAB40BQ12829 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RAB40BQ12829 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RAB40BQ12829 RNU6-169P-201ENST00000365336 107 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 RNY3P10-201ENST00000384764 102 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.11□□□□□ -2.07
RAB40BQ12829 UBE2V1P2-201ENST00000397758 440 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AL359511.1-201ENST00000402970 211 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 MIR1302-8-201ENST00000408342 128 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 RNU6-195P-201ENST00000411352 109 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.11□□□□□ -2.07
RAB40BQ12829 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.11□□□□□ -2.07
RAB40BQ12829 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.11□□□□□ -2.07
RAB40BQ12829 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RAB40BQ12829 ISCA1P6-201ENST00000427740 390 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.11□□□□□ -2.07
RAB40BQ12829 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.11□□□□□ -2.07
RAB40BQ12829 AC004924.1-201ENST00000480160 781 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AL049873.1-201ENST00000480540 376 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 RPL36AP48-201ENST00000485521 314 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC022493.1-201ENST00000492984 337 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.11□□□□□ -2.07
RAB40BQ12829 AC112206.3-201ENST00000514578 389 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 RNU1-104P-201ENST00000517280 175 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.11□□□□□ -2.07
RAB40BQ12829 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.11□□□□□ -2.07
RAB40BQ12829 AC234778.2-201ENST00000566241 354 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC137800.2-201ENST00000574375 120 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 MIR5194-201ENST00000582634 120 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.11□□□□□ -2.07
RAB40BQ12829 MIR548AC-201ENST00000585049 88 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC090578.1-201ENST00000604955 591 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AL033523.1-201ENST00000605153 153 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AL121992.2-201ENST00000606262 256 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.11□□□□□ -2.07
RAB40BQ12829 AP001506.1-201ENST00000615444 211 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RAB40BQ12829 AC092608.2-201ENST00000624427 218 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 MIR1291-201ENST00000627649 87 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
RAB40BQ12829 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
RAB40BQ12829 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.1□□□□□ -2.07
RAB40BQ12829 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40BQ12829 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40BQ12829 Z75746.1-201ENST00000440243 2080 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 FGF7P2-201ENST00000332473 296 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40BQ12829 MIR412-201ENST00000362142 91 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 SNORD3E-201ENST00000362899 217 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms