Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC026371.1-201ENST00000551867 419 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.23□□□□□ -1.89
RAE1P78406 MIR3922-201ENST00000585192 84 ntBASIC3.23□□□□□ -1.89
RAE1P78406 NUTF2P8-201ENST00000604593 363 ntBASIC3.23□□□□□ -1.89
RAE1P78406 MIR7851-201ENST00000610611 160 ntBASIC3.23□□□□□ -1.89
RAE1P78406 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.23□□□□□ -1.89
RAE1P78406 ATP5A1P2-202ENST00000616464 443 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AL731566.2-201ENST00000618971 317 ntBASIC3.23□□□□□ -1.89
RAE1P78406 CR392039.5-201ENST00000623201 510 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.23□□□□□ -1.89
RAE1P78406 AL034408.1-202ENST00000636088 415 ntBASIC3.23□□□□□ -1.89
RAE1P78406 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAE1P78406 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAE1P78406 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.23□□□□□ -1.89
RAE1P78406 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAE1P78406 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
RAE1P78406 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.22□□□□□ -1.89
RAE1P78406 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
RAE1P78406 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAE1P78406 TNPO1P3-201ENST00000436471 2662 ntBASIC3.22□□□□□ -1.89
RAE1P78406 RNU6-593P-201ENST00000364716 112 ntBASIC3.22□□□□□ -1.89
RAE1P78406 RNU1-64P-201ENST00000365443 163 ntBASIC3.22□□□□□ -1.89
RAE1P78406 MIR10A-201ENST00000385043 110 ntBASIC3.22□□□□□ -1.89
RAE1P78406 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RAE1P78406 MIR888-201ENST00000401186 77 ntBASIC3.22□□□□□ -1.89
RAE1P78406 RPL26P27-201ENST00000414397 437 ntBASIC3.22□□□□□ -1.89
RAE1P78406 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.22□□□□□ -1.89
RAE1P78406 ATG3P1-201ENST00000419507 911 ntBASIC3.22□□□□□ -1.89
RAE1P78406 UBE2V1P4-201ENST00000425374 344 ntBASIC3.22□□□□□ -1.89
RAE1P78406 AC007560.1-201ENST00000426912 237 ntBASIC3.22□□□□□ -1.89
RAE1P78406 AC018644.1-201ENST00000429934 551 ntBASIC3.22□□□□□ -1.89
RAE1P78406 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.22□□□□□ -1.89
RAE1P78406 RPL21P23-201ENST00000446654 460 ntBASIC3.22□□□□□ -1.89
RAE1P78406 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.22□□□□□ -1.89
RAE1P78406 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.22□□□□□ -1.89
RAE1P78406 RPL23AP67-201ENST00000465341 474 ntBASIC3.22□□□□□ -1.89
RAE1P78406 AC096745.1-201ENST00000509945 370 ntBASIC3.22□□□□□ -1.89
RAE1P78406 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.22□□□□□ -1.89
RAE1P78406 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.22□□□□□ -1.89
RAE1P78406 FRG2DP-202ENST00000566967 323 ntBASIC3.22□□□□□ -1.89
RAE1P78406 OR1M4P-201ENST00000589199 287 ntBASIC3.22□□□□□ -1.89
RAE1P78406 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.22□□□□□ -1.89
RAE1P78406 AL133255.1-201ENST00000606374 441 ntBASIC3.22□□□□□ -1.89
RAE1P78406 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.22□□□□□ -1.89
RAE1P78406 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
RAE1P78406 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RAE1P78406 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAE1P78406 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
RAE1P78406 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAE1P78406 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
RAE1P78406 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.89
RAE1P78406 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
RAE1P78406 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.21□□□□□ -1.89
RAE1P78406 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RAE1P78406 RNA5SP295-201ENST00000362655 121 ntBASIC3.21□□□□□ -1.9
RAE1P78406 RNU6-778P-201ENST00000363269 103 ntBASIC3.21□□□□□ -1.9
RAE1P78406 Y_RNA.126-201ENST00000363382 111 ntBASIC3.21□□□□□ -1.9
RAE1P78406 RNU6-1329P-201ENST00000365664 107 ntBASIC3.21□□□□□ -1.9
RAE1P78406 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAE1P78406 Y_RNA.482-201ENST00000384377 111 ntBASIC3.21□□□□□ -1.9
RAE1P78406 RNU6-95P-201ENST00000384697 107 ntBASIC3.21□□□□□ -1.9
RAE1P78406 MIR34A-201ENST00000385130 110 ntBASIC3.21□□□□□ -1.9
RAE1P78406 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.21□□□□□ -1.9
RAE1P78406 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.21□□□□□ -1.9
RAE1P78406 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.21□□□□□ -1.9
RAE1P78406 HMGN2P30-201ENST00000423237 256 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AL590632.1-201ENST00000424289 371 ntBASIC3.21□□□□□ -1.9
RAE1P78406 TOMM20P4-201ENST00000427861 435 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AC017083.1-201ENST00000428093 483 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.21□□□□□ -1.9
RAE1P78406 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.21□□□□□ -1.9
RAE1P78406 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.21□□□□□ -1.9
RAE1P78406 MTATP6P7-201ENST00000453315 681 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.21□□□□□ -1.9
RAE1P78406 RPL32P34-201ENST00000486380 400 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.21□□□□□ -1.9
RAE1P78406 AC026403.1-201ENST00000518938 295 ntBASIC3.21□□□□□ -1.9
RAE1P78406 H3F3AP1-201ENST00000559984 334 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.21□□□□□ -1.9
RAE1P78406 ELOCP5-201ENST00000604924 333 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AL353621.2-201ENST00000605340 133 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AC123912.5-201ENST00000605470 343 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AC002076.2-201ENST00000617362 122 ntBASIC3.21□□□□□ -1.9
RAE1P78406 MIR6076-201ENST00000617521 113 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AC126177.8-201ENST00000618339 1015 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AC010378.1-201ENST00000619270 362 ntBASIC3.21□□□□□ -1.9
RAE1P78406 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.21□□□□□ -1.9
RAE1P78406 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.21□□□□□ -1.9
RAE1P78406 AL359757.2-201ENST00000624309 274 ntBASIC3.21□□□□□ -1.9
RAE1P78406 Z69720.2-201ENST00000624755 279 ntBASIC3.21□□□□□ -1.9
RAE1P78406 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAE1P78406 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAE1P78406 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RAE1P78406 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAE1P78406 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAE1P78406 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
RAE1P78406 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RAE1P78406 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
RAE1P78406 Y_RNA.315-201ENST00000365117 102 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms