Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC0.66□□□□□ -2.3
RPS28P62857 RNA5SP148-201ENST00000516527 94 ntBASIC0.66□□□□□ -2.3
RPS28P62857 RNU6-572P-201ENST00000516724 80 ntBASIC0.66□□□□□ -2.3
RPS28P62857 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.66□□□□□ -2.3
RPS28P62857 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 HMGB1P33-201ENST00000563485 527 ntBASIC0.66□□□□□ -2.3
RPS28P62857 RPAP2P1-201ENST00000603626 1168 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AC211469.2-201ENST00000605461 205 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AL020996.3-201ENST00000606617 222 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AC103710.1-201ENST00000610003 901 ntBASIC0.66□□□□□ -2.3
RPS28P62857 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.66□□□□□ -2.3
RPS28P62857 MIR6737-201ENST00000617385 70 ntBASIC0.66□□□□□ -2.3
RPS28P62857 MIR6729-201ENST00000618194 65 ntBASIC0.66□□□□□ -2.3
RPS28P62857 MIR7975-201ENST00000619350 68 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AC009033.1-201ENST00000624279 431 ntBASIC0.66□□□□□ -2.3
RPS28P62857 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC0.66□□□□□ -2.3
RPS28P62857 DDX43P2-201ENST00000604753 1354 ntBASIC0.66□□□□□ -2.3
RPS28P62857 ZNF209P-201ENST00000593450 2304 ntBASIC0.66□□□□□ -2.3
RPS28P62857 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.66□□□□□ -2.3
RPS28P62857 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RPS28P62857 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.65□□□□□ -2.31
RPS28P62857 MTCO1P56-201ENST00000401674 224 ntBASIC0.65□□□□□ -2.31
RPS28P62857 FTH1P15-201ENST00000406984 280 ntBASIC0.65□□□□□ -2.31
RPS28P62857 RPL21P24-201ENST00000413752 448 ntBASIC0.65□□□□□ -2.31
RPS28P62857 OR6C66P-201ENST00000414917 930 ntBASIC0.65□□□□□ -2.31
RPS28P62857 EBAG9P1-201ENST00000418955 543 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC0.65□□□□□ -2.31
RPS28P62857 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.65□□□□□ -2.31
RPS28P62857 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC0.65□□□□□ -2.31
RPS28P62857 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC0.65□□□□□ -2.31
RPS28P62857 MTND2P4-201ENST00000445034 1004 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AC016724.1-201ENST00000453215 421 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.65□□□□□ -2.31
RPS28P62857 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.65□□□□□ -2.31
RPS28P62857 CAB39P1-201ENST00000502277 460 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AC069306.1-201ENST00000507006 843 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.65□□□□□ -2.31
RPS28P62857 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.65□□□□□ -2.31
RPS28P62857 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.65□□□□□ -2.31
RPS28P62857 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC0.65□□□□□ -2.31
RPS28P62857 AC018630.3-201ENST00000542637 96 ntBASIC0.65□□□□□ -2.31
RPS28P62857 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.65□□□□□ -2.31
RPS28P62857 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.65□□□□□ -2.31
RPS28P62857 AC026464.5-201ENST00000562497 722 ntBASIC0.65□□□□□ -2.31
RPS28P62857 MIR5094-201ENST00000578766 85 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
RPS28P62857 AC021171.1-201ENST00000603137 706 ntBASIC0.65□□□□□ -2.31
RPS28P62857 MIR6758-201ENST00000620653 63 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AL445264.1-201ENST00000621719 171 ntBASIC0.65□□□□□ -2.31
RPS28P62857 AC027335.2-201ENST00000624030 375 ntBASIC0.65□□□□□ -2.31
RPS28P62857 MIR219B-201ENST00000637023 88 ntBASIC0.65□□□□□ -2.31
RPS28P62857 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
RPS28P62857 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RPS28P62857 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.64□□□□□ -2.31
RPS28P62857 RNU6-529P-201ENST00000363383 104 ntBASIC0.64□□□□□ -2.31
RPS28P62857 RNU6-188P-201ENST00000364207 107 ntBASIC0.64□□□□□ -2.31
RPS28P62857 SNORA70.2-201ENST00000364506 135 ntBASIC0.64□□□□□ -2.31
RPS28P62857 Y_RNA.255-201ENST00000364581 97 ntBASIC0.64□□□□□ -2.31
RPS28P62857 RNU6-343P-201ENST00000364709 104 ntBASIC0.64□□□□□ -2.31
RPS28P62857 RNU1-36P-201ENST00000365130 165 ntBASIC0.64□□□□□ -2.31
RPS28P62857 MIR29B2-201ENST00000385055 81 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.64□□□□□ -2.31
RPS28P62857 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.64□□□□□ -2.31
RPS28P62857 AC013410.2-201ENST00000422627 201 ntBASIC0.64□□□□□ -2.31
RPS28P62857 CR848007.2-201ENST00000424918 787 ntBASIC0.64□□□□□ -2.31
RPS28P62857 KATNBL1P3-201ENST00000443475 909 ntBASIC0.64□□□□□ -2.31
RPS28P62857 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC0.64□□□□□ -2.31
RPS28P62857 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC0.64□□□□□ -2.31
RPS28P62857 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RPS28P62857 OR2AQ1P-201ENST00000451972 200 ntBASIC0.64□□□□□ -2.31
RPS28P62857 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.64□□□□□ -2.31
RPS28P62857 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.64□□□□□ -2.31
RPS28P62857 SNORD116-28-201ENST00000516123 91 ntBASIC0.64□□□□□ -2.31
RPS28P62857 RN7SKP88-201ENST00000516847 250 ntBASIC0.64□□□□□ -2.31
RPS28P62857 SNORA76.2-201ENST00000517095 137 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AP001646.1-201ENST00000527936 915 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC0.64□□□□□ -2.31
RPS28P62857 OR6C7P-201ENST00000547875 934 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.64□□□□□ -2.31
RPS28P62857 MIR4789-201ENST00000577469 82 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.64□□□□□ -2.31
RPS28P62857 7SK.8-201ENST00000612110 250 ntBASIC0.64□□□□□ -2.31
RPS28P62857 7SK.11-201ENST00000615477 250 ntBASIC0.64□□□□□ -2.31
RPS28P62857 RMST_4.1-201ENST00000616886 107 ntBASIC0.64□□□□□ -2.31
RPS28P62857 7SK.13-201ENST00000622040 250 ntBASIC0.64□□□□□ -2.31
RPS28P62857 MIR6730-201ENST00000622213 67 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AC120349.2-201ENST00000625002 298 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AC097655.1-201ENST00000635075 318 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AC068205.3-201ENST00000636385 468 ntBASIC0.64□□□□□ -2.31
RPS28P62857 U6.105-201ENST00000637379 88 ntBASIC0.64□□□□□ -2.31
RPS28P62857 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
RPS28P62857 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.64□□□□□ -2.31
RPS28P62857 MTND5P35-201ENST00000557537 1720 ntBASIC0.64□□□□□ -2.31
RPS28P62857 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC0.64□□□□□ -2.31
RPS28P62857 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.64□□□□□ -2.31
RPS28P62857 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms