Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.09□□□□□ -2.07
PKNOX1P55347 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.09□□□□□ -2.07
PKNOX1P55347 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PKNOX1P55347 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PKNOX1P55347 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PKNOX1P55347 RNU5F-7P-201ENST00000363696 115 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.09□□□□□ -2.07
PKNOX1P55347 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 RNU6-1025P-201ENST00000410629 104 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.09□□□□□ -2.07
PKNOX1P55347 Z99497.1-201ENST00000421282 135 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.09□□□□□ -2.07
PKNOX1P55347 Z98742.2-201ENST00000431564 187 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AC236972.1-201ENST00000433225 199 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 FABP5P14-201ENST00000437273 393 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 TAF9P1-201ENST00000445421 515 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 USP9YP12-201ENST00000450481 570 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AL118520.1-201ENST00000450770 291 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.09□□□□□ -2.07
PKNOX1P55347 TAF9P2-201ENST00000454958 515 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 MTCO2P29-201ENST00000465212 189 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 DYNLL1P5-201ENST00000467158 270 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 BZW1P2-201ENST00000473537 826 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 RPL23AP49-201ENST00000492925 468 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AC114781.4-201ENST00000513707 639 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.09□□□□□ -2.07
PKNOX1P55347 Y_RNA.689-201ENST00000516589 107 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.09□□□□□ -2.07
PKNOX1P55347 AC022878.1-201ENST00000530684 149 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PKNOX1P55347 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
PKNOX1P55347 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.09□□□□□ -2.07
PKNOX1P55347 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.09□□□□□ -2.07
PKNOX1P55347 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.09□□□□□ -2.07
PKNOX1P55347 BNIP3P22-201ENST00000593399 556 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AL451064.1-201ENST00000607718 471 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AC087683.2-201ENST00000611384 326 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PKNOX1P55347 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AC025048.6-202ENST00000627667 438 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AC004944.1-201ENST00000517807 3059 ntBASIC2.09□□□□□ -2.07
PKNOX1P55347 AL109809.4-201ENST00000603520 2185 ntBASIC2.09□□□□□ -2.08
PKNOX1P55347 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PKNOX1P55347 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PKNOX1P55347 AL359854.1-201ENST00000614203 1594 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 RNU6-166P-201ENST00000384371 107 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 MIR147B-201ENST00000390185 80 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AL031577.2-201ENST00000404133 280 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AC007560.1-201ENST00000426912 237 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 RPL23AP30-201ENST00000432419 501 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AC119618.1-201ENST00000434191 222 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 RAP1BP2-201ENST00000478270 544 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AC023194.1-201ENST00000493084 308 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AC116655.1-201ENST00000508324 901 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 MTND1P22-201ENST00000510572 951 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 ACA59.2-201ENST00000517061 156 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AC106038.2-201ENST00000520706 568 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.08□□□□□ -2.08
PKNOX1P55347 SNRPGP18-201ENST00000553000 214 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 MIR1273C-201ENST00000578669 77 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 MIR548AB-201ENST00000584917 84 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 MIR4765-201ENST00000585007 77 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AC012065.4-201ENST00000602445 679 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AC092354.1-201ENST00000606057 376 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AC005332.10-201ENST00000612725 619 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.08□□□□□ -2.08
PKNOX1P55347 AC009090.3-201ENST00000616553 565 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AL031601.2-202ENST00000622650 282 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PKNOX1P55347 AL136360.1-201ENST00000503377 1900 ntBASIC2.08□□□□□ -2.08
PKNOX1P55347 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
PKNOX1P55347 TEX21P-201ENST00000447107 1476 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PKNOX1P55347 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.07□□□□□ -2.08
PKNOX1P55347 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
PKNOX1P55347 RNA5SP289-201ENST00000362332 137 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PKNOX1P55347 BTF3P7-201ENST00000407097 488 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 U6atac.2-201ENST00000408644 118 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.07□□□□□ -2.08
PKNOX1P55347 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
PKNOX1P55347 MTND4P20-201ENST00000424125 869 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.07□□□□□ -2.08
PKNOX1P55347 RPS15AP9-201ENST00000439856 381 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 UBE2D3P4-201ENST00000441973 436 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AL078601.1-201ENST00000444542 271 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 HIGD1AP2-201ENST00000446367 280 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.07□□□□□ -2.08
PKNOX1P55347 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms