Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU2-49P-201ENST00000410666 184 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H2P55055 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.17□□□□□ -1.9
NR1H2P55055 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H2P55055 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H2P55055 AL627311.1-201ENST00000431514 115 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 MYL8P-204ENST00000431574 518 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.17□□□□□ -1.9
NR1H2P55055 AL441985.1-201ENST00000457727 251 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 RPL27AP5-201ENST00000469428 449 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H2P55055 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H2P55055 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H2P55055 LRRC34P2-201ENST00000514850 553 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H2P55055 AC006199.1-201ENST00000548728 219 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NR1H2P55055 AC010620.2-201ENST00000600135 313 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 AC087045.1-201ENST00000605856 382 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 DISC2.1-201ENST00000612827 205 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 MIR6134-201ENST00000617606 109 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NR1H2P55055 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NR1H2P55055 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NR1H2P55055 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.17□□□□□ -1.9
NR1H2P55055 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NR1H2P55055 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H2P55055 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
NR1H2P55055 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H2P55055 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H2P55055 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H2P55055 RNU6-451P-201ENST00000362921 107 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 AL512633.1-201ENST00000399931 655 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 NDUFB4P4-201ENST00000404822 243 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 AL606923.1-201ENST00000406616 190 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 RNA5SP344-201ENST00000411081 104 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 OR9R1P-201ENST00000412200 877 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.16□□□□□ -1.9
NR1H2P55055 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H2P55055 AL161651.1-201ENST00000440882 223 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 RBMX2P4-201ENST00000441256 376 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H2P55055 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H2P55055 SNORA59A-201ENST00000459326 152 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 RPL21P10-201ENST00000463521 490 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 AC069439.1-201ENST00000494739 167 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.16□□□□□ -1.9
NR1H2P55055 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.16□□□□□ -1.9
NR1H2P55055 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H2P55055 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
NR1H2P55055 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H2P55055 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.16□□□□□ -1.9
NR1H2P55055 CYCSP39-201ENST00000565821 309 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 AC015917.1-201ENST00000579654 510 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.16□□□□□ -1.9
NR1H2P55055 AC005000.2-201ENST00000605468 310 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.16□□□□□ -1.9
NR1H2P55055 AC024614.3-201ENST00000637860 256 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 HSPA8P4-201ENST00000511877 1920 ntBASIC3.16□□□□□ -1.9
NR1H2P55055 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H2P55055 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.16□□□□□ -1.9
NR1H2P55055 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H2P55055 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NR1H2P55055 RNU6-1283P-201ENST00000365314 105 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NR1H2P55055 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NR1H2P55055 RNU6-166P-201ENST00000384371 107 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 SNORA48.2-201ENST00000390926 124 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 Y_RNA.623-201ENST00000411128 95 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H2P55055 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.15□□□□□ -1.91
NR1H2P55055 TOMM20P4-201ENST00000427861 435 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H2P55055 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H2P55055 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H2P55055 AC006026.2-201ENST00000457376 180 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 RNU4-29P-201ENST00000515943 174 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 SNORD60.2-201ENST00000516883 86 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.15□□□□□ -1.91
NR1H2P55055 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H2P55055 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NR1H2P55055 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H2P55055 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.15□□□□□ -1.91
NR1H2P55055 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H2P55055 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H2P55055 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H2P55055 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NR1H2P55055 AC002064.3-201ENST00000623448 346 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 AP003355.3-201ENST00000623465 114 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 MIR3651-201ENST00000630427 90 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 MIR3662-201ENST00000637030 95 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H2P55055 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H2P55055 CDC27P3-201ENST00000635418 1910 ntBASIC3.15□□□□□ -1.91
NR1H2P55055 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
NR1H2P55055 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms