Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SNORD97-201ENST00000459187 142 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 MTCO2P29-201ENST00000465212 189 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 RN7SL429P-201ENST00000479090 223 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 RN7SL489P-201ENST00000486185 223 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 RN7SL327P-201ENST00000488659 223 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 RAC1P5-201ENST00000512182 576 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMK2P53671 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.68□□□□□ -1.98
LIMK2P53671 Y_RNA.704-201ENST00000516851 102 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LIMK2P53671 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LIMK2P53671 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMK2P53671 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMK2P53671 MIR4635-201ENST00000583759 79 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.68□□□□□ -1.98
LIMK2P53671 AC104458.1-201ENST00000608243 463 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMK2P53671 RN7SL853P-201ENST00000617250 223 ntBASIC2.68□□□□□ -1.98
LIMK2P53671 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.68□□□□□ -1.98
LIMK2P53671 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
LIMK2P53671 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
LIMK2P53671 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIMK2P53671 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
LIMK2P53671 AC004944.1-201ENST00000517807 3059 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 RNU6-859P-201ENST00000362728 107 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 RNU6-1167P-201ENST00000363227 94 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 RNU6-511P-201ENST00000363496 107 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 RNU1-112P-201ENST00000364401 164 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 Y_RNA.303-201ENST00000364998 94 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 Y_RNA.453-201ENST00000384223 109 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 RNA5SP21-201ENST00000410917 96 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 BTF3L4P3-201ENST00000418879 476 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 ELOCP14-201ENST00000428070 331 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.67□□□□□ -1.98
LIMK2P53671 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 ELOCP7-201ENST00000439968 331 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 NFU1P2-201ENST00000448700 469 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 AC023194.1-201ENST00000493084 308 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 PRDX4P1-201ENST00000507189 574 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 Y_RNA.693-201ENST00000516641 110 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 AC090572.1-201ENST00000519251 160 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK2P53671 AP003072.2-201ENST00000527756 676 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC128657.1-201ENST00000549459 145 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMK2P53671 AL157687.1-201ENST00000554853 619 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 SUB1P2-201ENST00000556401 297 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AL391261.3-201ENST00000557194 520 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.67□□□□□ -1.98
LIMK2P53671 AC020895.1-201ENST00000595362 272 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AL670379.6-201ENST00000603753 252 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AL670379.11-201ENST00000604059 253 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AP000907.4-201ENST00000604143 237 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC008162.1-201ENST00000604718 254 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC007363.1-201ENST00000604736 620 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AL670379.1-201ENST00000604752 252 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AL670379.5-201ENST00000605253 252 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AL670379.12-201ENST00000605291 253 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AL670379.8-201ENST00000605353 252 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AL670379.7-201ENST00000605823 252 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC006338.1-201ENST00000618453 749 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 AC139792.3-201ENST00000623525 224 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 FRG1KP-201ENST00000623592 341 ntBASIC2.67□□□□□ -1.98
LIMK2P53671 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMK2P53671 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMK2P53671 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIMK2P53671 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.66□□□□□ -1.98
LIMK2P53671 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIMK2P53671 RNU6-1085P-201ENST00000363576 107 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 RNU1-100P-201ENST00000365255 165 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 MIR34A-201ENST00000385130 110 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 MIR888-201ENST00000401186 77 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 AL139397.2-201ENST00000404529 772 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK2P53671 ELOCP4-201ENST00000420090 333 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 AL139413.1-201ENST00000421309 217 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 RAC1P6-201ENST00000423911 575 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 RPL23AP20-201ENST00000447965 421 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK2P53671 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK2P53671 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK2P53671 CACYBPP2-201ENST00000453625 678 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 RPL12P25-201ENST00000455592 494 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 RPL37P6-201ENST00000460682 294 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 RPL31P58-201ENST00000469001 379 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 AC069439.1-201ENST00000494739 167 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 AC114781.4-201ENST00000513707 639 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.66□□□□□ -1.98
LIMK2P53671 AP006587.4-201ENST00000526053 529 ntBASIC2.66□□□□□ -1.98
LIMK2P53671 AC011979.2-201ENST00000527568 352 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms