Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.17□□□□□ -2.22
NUP98P52948 AC092648.1-201ENST00000425870 423 ntBASIC1.17□□□□□ -2.22
NUP98P52948 AC015922.2-201ENST00000435593 184 ntBASIC1.17□□□□□ -2.22
NUP98P52948 RSU1P2-202ENST00000437884 485 ntBASIC1.17□□□□□ -2.22
NUP98P52948 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.17□□□□□ -2.22
NUP98P52948 MRPL42P4-201ENST00000453267 443 ntBASIC1.17□□□□□ -2.22
NUP98P52948 AC026410.2-201ENST00000460281 156 ntBASIC1.17□□□□□ -2.22
NUP98P52948 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.17□□□□□ -2.22
NUP98P52948 MIR449C-201ENST00000516047 92 ntBASIC1.17□□□□□ -2.22
NUP98P52948 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.17□□□□□ -2.22
NUP98P52948 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NUP98P52948 BNIP3P23-201ENST00000599655 511 ntBASIC1.17□□□□□ -2.22
NUP98P52948 AL138478.1-201ENST00000612252 832 ntBASIC1.17□□□□□ -2.22
NUP98P52948 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NUP98P52948 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NUP98P52948 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.16□□□□□ -2.22
NUP98P52948 Y_RNA.36-201ENST00000362602 112 ntBASIC1.16□□□□□ -2.22
NUP98P52948 RNU6-216P-201ENST00000363282 104 ntBASIC1.16□□□□□ -2.22
NUP98P52948 RNU5E-8P-201ENST00000363502 116 ntBASIC1.16□□□□□ -2.22
NUP98P52948 SNORA23-201ENST00000365128 182 ntBASIC1.16□□□□□ -2.22
NUP98P52948 MIR217-201ENST00000384817 110 ntBASIC1.16□□□□□ -2.22
NUP98P52948 MIR150-201ENST00000385048 84 ntBASIC1.16□□□□□ -2.22
NUP98P52948 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
NUP98P52948 POLR2J4-204ENST00000418424 324 ntBASIC1.16□□□□□ -2.22
NUP98P52948 AC244453.4-201ENST00000419150 388 ntBASIC1.16□□□□□ -2.22
NUP98P52948 AC006512.1-201ENST00000468816 291 ntBASIC1.16□□□□□ -2.22
NUP98P52948 RPS27AP10-201ENST00000496103 208 ntBASIC1.16□□□□□ -2.22
NUP98P52948 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.16□□□□□ -2.22
NUP98P52948 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.16□□□□□ -2.22
NUP98P52948 AC125611.1-201ENST00000549563 229 ntBASIC1.16□□□□□ -2.22
NUP98P52948 MIR4637-201ENST00000582405 84 ntBASIC1.16□□□□□ -2.22
NUP98P52948 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.16□□□□□ -2.22
NUP98P52948 AL596245.1-201ENST00000618994 362 ntBASIC1.16□□□□□ -2.22
NUP98P52948 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NUP98P52948 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NUP98P52948 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
NUP98P52948 MIR598-201ENST00000384868 97 ntBASIC1.15□□□□□ -2.22
NUP98P52948 TAF13P2-201ENST00000416876 286 ntBASIC1.15□□□□□ -2.22
NUP98P52948 AL449283.1-202ENST00000418249 604 ntBASIC1.15□□□□□ -2.22
NUP98P52948 MTCO2P5-201ENST00000422621 426 ntBASIC1.15□□□□□ -2.22
NUP98P52948 PTGES3P4-201ENST00000426243 356 ntBASIC1.15□□□□□ -2.22
NUP98P52948 ELOCP14-201ENST00000428070 331 ntBASIC1.15□□□□□ -2.22
NUP98P52948 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.15□□□□□ -2.22
NUP98P52948 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.15□□□□□ -2.22
NUP98P52948 ELOCP7-201ENST00000439968 331 ntBASIC1.15□□□□□ -2.22
NUP98P52948 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.15□□□□□ -2.22
NUP98P52948 RNFT1P2-201ENST00000443064 757 ntBASIC1.15□□□□□ -2.22
NUP98P52948 MTND1P9-201ENST00000453775 944 ntBASIC1.15□□□□□ -2.22
NUP98P52948 AC091860.1-201ENST00000505723 432 ntBASIC1.15□□□□□ -2.22
NUP98P52948 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.15□□□□□ -2.22
NUP98P52948 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.15□□□□□ -2.22
NUP98P52948 AC022254.1-201ENST00000567857 235 ntBASIC1.15□□□□□ -2.22
NUP98P52948 ADAM3B-201ENST00000569937 840 ntBASIC1.15□□□□□ -2.22
NUP98P52948 ROCK1P1-201ENST00000573767 549 ntBASIC1.15□□□□□ -2.22
NUP98P52948 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.15□□□□□ -2.22
NUP98P52948 AC002545.1-201ENST00000592511 181 ntBASIC1.15□□□□□ -2.22
NUP98P52948 MTCYBP22-201ENST00000603788 447 ntBASIC1.15□□□□□ -2.22
NUP98P52948 FAM71BP1-201ENST00000604431 523 ntBASIC1.15□□□□□ -2.22
NUP98P52948 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.15□□□□□ -2.22
NUP98P52948 AL138713.1-201ENST00000624026 2130 ntBASIC1.15□□□□□ -2.22
NUP98P52948 AC019226.1-201ENST00000625666 515 ntBASIC1.15□□□□□ -2.22
NUP98P52948 AC087821.2-201ENST00000637086 450 ntBASIC1.15□□□□□ -2.22
NUP98P52948 Z75746.1-201ENST00000440243 2080 ntBASIC1.15□□□□□ -2.23
NUP98P52948 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
NUP98P52948 SUGT1P1-201ENST00000379514 476 ntBASIC1.15□□□□□ -2.23
NUP98P52948 PTGES3P2-201ENST00000407942 482 ntBASIC1.15□□□□□ -2.23
NUP98P52948 MIR1302-8-201ENST00000408342 128 ntBASIC1.15□□□□□ -2.23
NUP98P52948 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.15□□□□□ -2.23
NUP98P52948 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.15□□□□□ -2.23
NUP98P52948 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.15□□□□□ -2.23
NUP98P52948 TRIM60P13-201ENST00000432350 1283 ntBASIC1.15□□□□□ -2.23
NUP98P52948 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.15□□□□□ -2.23
NUP98P52948 SNORD97-201ENST00000459187 142 ntBASIC1.15□□□□□ -2.23
NUP98P52948 HMGB1P35-201ENST00000503360 598 ntBASIC1.15□□□□□ -2.23
NUP98P52948 FAM206BP-201ENST00000510179 541 ntBASIC1.15□□□□□ -2.23
NUP98P52948 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.15□□□□□ -2.23
NUP98P52948 AL359212.1-201ENST00000556608 614 ntBASIC1.15□□□□□ -2.23
NUP98P52948 AL731537.2-201ENST00000561565 951 ntBASIC1.15□□□□□ -2.23
NUP98P52948 AL357094.1-201ENST00000603845 844 ntBASIC1.15□□□□□ -2.23
NUP98P52948 AC009268.2-201ENST00000621925 457 ntBASIC1.15□□□□□ -2.23
NUP98P52948 AC092192.1-201ENST00000633154 1018 ntBASIC1.15□□□□□ -2.23
NUP98P52948 Y_RNA.25-201ENST00000362528 102 ntBASIC1.14□□□□□ -2.23
NUP98P52948 RNU6-223P-201ENST00000362830 107 ntBASIC1.14□□□□□ -2.23
NUP98P52948 RNU6-486P-201ENST00000363116 107 ntBASIC1.14□□□□□ -2.23
NUP98P52948 RNU6-839P-201ENST00000363347 108 ntBASIC1.14□□□□□ -2.23
NUP98P52948 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
NUP98P52948 RNU6-481P-201ENST00000384194 107 ntBASIC1.14□□□□□ -2.23
NUP98P52948 RNU6-883P-201ENST00000384597 107 ntBASIC1.14□□□□□ -2.23
NUP98P52948 AC097463.2-201ENST00000421074 142 ntBASIC1.14□□□□□ -2.23
NUP98P52948 CR848007.2-201ENST00000424918 787 ntBASIC1.14□□□□□ -2.23
NUP98P52948 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.14□□□□□ -2.23
NUP98P52948 HMGN2P10-201ENST00000448085 265 ntBASIC1.14□□□□□ -2.23
NUP98P52948 HSPE1P24-201ENST00000450782 238 ntBASIC1.14□□□□□ -2.23
NUP98P52948 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.14□□□□□ -2.23
NUP98P52948 DEFB108E-201ENST00000524692 240 ntBASIC1.14□□□□□ -2.23
NUP98P52948 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.14□□□□□ -2.23
NUP98P52948 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.14□□□□□ -2.23
NUP98P52948 AC090615.1-201ENST00000577519 154 ntBASIC1.14□□□□□ -2.23
NUP98P52948 MIR3167-201ENST00000579623 85 ntBASIC1.14□□□□□ -2.23
NUP98P52948 MIR4666A-201ENST00000580160 79 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms