Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.47□□□□□ -1.85
NEK3P51956 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NEK3P51956 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.46□□□□□ -1.85
NEK3P51956 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
NEK3P51956 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.46□□□□□ -1.86
NEK3P51956 AC007496.3-201ENST00000624987 3443 ntBASIC3.46□□□□□ -1.86
NEK3P51956 OR4G1P-203ENST00000641984 1631 ntBASIC3.46□□□□□ -1.86
NEK3P51956 RNU6-451P-201ENST00000362921 107 ntBASIC3.46□□□□□ -1.86
NEK3P51956 Y_RNA.231-201ENST00000364358 102 ntBASIC3.46□□□□□ -1.86
NEK3P51956 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NEK3P51956 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NEK3P51956 Y_RNA.453-201ENST00000384223 109 ntBASIC3.46□□□□□ -1.86
NEK3P51956 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NEK3P51956 MIR1277-201ENST00000408536 78 ntBASIC3.46□□□□□ -1.86
NEK3P51956 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.46□□□□□ -1.86
NEK3P51956 RNU6-373P-201ENST00000411247 98 ntBASIC3.46□□□□□ -1.86
NEK3P51956 BX682237.1-201ENST00000415016 335 ntBASIC3.46□□□□□ -1.86
NEK3P51956 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.46□□□□□ -1.86
NEK3P51956 RPL23AP22-201ENST00000437556 453 ntBASIC3.46□□□□□ -1.86
NEK3P51956 RPL23AP58-201ENST00000440453 469 ntBASIC3.46□□□□□ -1.86
NEK3P51956 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.46□□□□□ -1.86
NEK3P51956 FGF7P6-202ENST00000451282 293 ntBASIC3.46□□□□□ -1.86
NEK3P51956 MTND3P16-201ENST00000452205 344 ntBASIC3.46□□□□□ -1.86
NEK3P51956 AC233279.1-201ENST00000455300 423 ntBASIC3.46□□□□□ -1.86
NEK3P51956 Y_RNA.654-201ENST00000497848 106 ntBASIC3.46□□□□□ -1.86
NEK3P51956 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.46□□□□□ -1.86
NEK3P51956 IGKV2-26-201ENST00000518305 343 ntBASIC3.46□□□□□ -1.86
NEK3P51956 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.46□□□□□ -1.86
NEK3P51956 AC090115.3-201ENST00000553218 849 ntBASIC3.46□□□□□ -1.86
NEK3P51956 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.46□□□□□ -1.86
NEK3P51956 AC010620.2-201ENST00000600135 313 ntBASIC3.46□□□□□ -1.86
NEK3P51956 uc_338.14-201ENST00000613162 166 ntBASIC3.46□□□□□ -1.86
NEK3P51956 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.46□□□□□ -1.86
NEK3P51956 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.46□□□□□ -1.86
NEK3P51956 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEK3P51956 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.45□□□□□ -1.86
NEK3P51956 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
NEK3P51956 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NEK3P51956 Y_RNA.89-201ENST00000363031 102 ntBASIC3.45□□□□□ -1.86
NEK3P51956 RNU6-1090P-201ENST00000364065 94 ntBASIC3.45□□□□□ -1.86
NEK3P51956 Y_RNA.324-201ENST00000365165 102 ntBASIC3.45□□□□□ -1.86
NEK3P51956 RNU6-877P-201ENST00000383868 107 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AL122016.1-201ENST00000403365 367 ntBASIC3.45□□□□□ -1.86
NEK3P51956 RPS4XP7-201ENST00000406274 780 ntBASIC3.45□□□□□ -1.86
NEK3P51956 RNU6-1068P-201ENST00000410958 103 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AC126124.2-201ENST00000413542 321 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.45□□□□□ -1.86
NEK3P51956 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.45□□□□□ -1.86
NEK3P51956 AL121769.1-201ENST00000469473 401 ntBASIC3.45□□□□□ -1.86
NEK3P51956 RPL21P99-201ENST00000480369 423 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.45□□□□□ -1.86
NEK3P51956 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.45□□□□□ -1.86
NEK3P51956 HIGD1AP13-201ENST00000509878 289 ntBASIC3.45□□□□□ -1.86
NEK3P51956 RNU6-189P-201ENST00000516120 101 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AC107934.2-201ENST00000518653 310 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AC093331.1-201ENST00000521474 169 ntBASIC3.45□□□□□ -1.86
NEK3P51956 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.45□□□□□ -1.86
NEK3P51956 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.45□□□□□ -1.86
NEK3P51956 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.45□□□□□ -1.86
NEK3P51956 AC011471.1-201ENST00000585766 187 ntBASIC3.45□□□□□ -1.86
NEK3P51956 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.45□□□□□ -1.86
NEK3P51956 AP000787.2-201ENST00000604432 568 ntBASIC3.45□□□□□ -1.86
NEK3P51956 RNU6-91P-201ENST00000607774 107 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AC103705.1-201ENST00000619013 241 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AC026585.1-201ENST00000619582 524 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AC138915.1-201ENST00000565427 1685 ntBASIC3.45□□□□□ -1.86
NEK3P51956 AC073346.2-201ENST00000624724 2058 ntBASIC3.45□□□□□ -1.86
NEK3P51956 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.44□□□□□ -1.86
NEK3P51956 HAUS6P2-201ENST00000433254 2404 ntBASIC3.44□□□□□ -1.86
NEK3P51956 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.44□□□□□ -1.86
NEK3P51956 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NEK3P51956 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NEK3P51956 RNU6-1083P-201ENST00000384022 107 ntBASIC3.44□□□□□ -1.86
NEK3P51956 EI24P2-201ENST00000397776 1076 ntBASIC3.44□□□□□ -1.86
NEK3P51956 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.44□□□□□ -1.86
NEK3P51956 RPLP0P7-201ENST00000416050 667 ntBASIC3.44□□□□□ -1.86
NEK3P51956 AC016831.2-201ENST00000417179 352 ntBASIC3.44□□□□□ -1.86
NEK3P51956 SRIP2-201ENST00000428470 166 ntBASIC3.44□□□□□ -1.86
NEK3P51956 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.44□□□□□ -1.86
NEK3P51956 ERLEC1P1-201ENST00000433806 578 ntBASIC3.44□□□□□ -1.86
NEK3P51956 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.44□□□□□ -1.86
NEK3P51956 AL121601.2-201ENST00000438019 707 ntBASIC3.44□□□□□ -1.86
NEK3P51956 MTATP6P13-201ENST00000438531 667 ntBASIC3.44□□□□□ -1.86
NEK3P51956 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.44□□□□□ -1.86
NEK3P51956 DYNLL1P5-201ENST00000467158 270 ntBASIC3.44□□□□□ -1.86
NEK3P51956 RPL27AP5-201ENST00000469428 449 ntBASIC3.44□□□□□ -1.86
NEK3P51956 GZMAP1-201ENST00000503054 631 ntBASIC3.44□□□□□ -1.86
NEK3P51956 CCDC34P1-201ENST00000507441 517 ntBASIC3.44□□□□□ -1.86
NEK3P51956 RNU6-581P-201ENST00000516214 105 ntBASIC3.44□□□□□ -1.86
NEK3P51956 ACA59.2-201ENST00000517061 156 ntBASIC3.44□□□□□ -1.86
NEK3P51956 SNORA25.17-201ENST00000517184 124 ntBASIC3.44□□□□□ -1.86
NEK3P51956 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.44□□□□□ -1.86
NEK3P51956 AC068657.1-201ENST00000520807 306 ntBASIC3.44□□□□□ -1.86
NEK3P51956 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.44□□□□□ -1.86
NEK3P51956 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.44□□□□□ -1.86
NEK3P51956 MIR5583-1-201ENST00000580941 59 ntBASIC3.44□□□□□ -1.86
NEK3P51956 AC005261.5-201ENST00000596280 355 ntBASIC3.44□□□□□ -1.86
NEK3P51956 AC104458.1-201ENST00000608243 463 ntBASIC3.44□□□□□ -1.86
NEK3P51956 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.44□□□□□ -1.86
NEK3P51956 Z69720.2-201ENST00000624755 279 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms