Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNRPEP10-201ENST00000420249 274 ntBASIC2.89□□□□□ -1.95
CLK1P49759 BPY2DP-201ENST00000422208 265 ntBASIC2.89□□□□□ -1.95
CLK1P49759 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 AC005326.1-201ENST00000429197 123 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AL606489.2-201ENST00000433886 234 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 MTND5P30-201ENST00000452896 1731 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AC133134.1-201ENST00000466800 359 ntBASIC2.89□□□□□ -1.95
CLK1P49759 RPS29P20-201ENST00000489592 171 ntBASIC2.89□□□□□ -1.95
CLK1P49759 RPS15AP36-201ENST00000492022 382 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.89□□□□□ -1.95
CLK1P49759 AC098591.2-201ENST00000510152 315 ntBASIC2.89□□□□□ -1.95
CLK1P49759 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.89□□□□□ -1.95
CLK1P49759 RNU6-927P-201ENST00000516199 100 ntBASIC2.89□□□□□ -1.95
CLK1P49759 SNORD27.1-201ENST00000516319 72 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 MIR2682-201ENST00000580305 110 ntBASIC2.89□□□□□ -1.95
CLK1P49759 MIR3944-201ENST00000581277 108 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AC005730.3-201ENST00000583067 366 ntBASIC2.89□□□□□ -1.95
CLK1P49759 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 AC012119.1-201ENST00000603184 222 ntBASIC2.89□□□□□ -1.95
CLK1P49759 BNIP3P9-201ENST00000603714 553 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AC009994.1-201ENST00000606889 253 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AL359314.1-201ENST00000616913 261 ntBASIC2.89□□□□□ -1.95
CLK1P49759 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.89□□□□□ -1.95
CLK1P49759 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.89□□□□□ -1.95
CLK1P49759 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
CLK1P49759 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CLK1P49759 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLK1P49759 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLK1P49759 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CLK1P49759 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.88□□□□□ -1.95
CLK1P49759 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CLK1P49759 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLK1P49759 RNU2-9P-201ENST00000410194 145 ntBASIC2.88□□□□□ -1.95
CLK1P49759 RNA5SP120-201ENST00000410900 112 ntBASIC2.88□□□□□ -1.95
CLK1P49759 RPL26P27-201ENST00000414397 437 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.88□□□□□ -1.95
CLK1P49759 ZNF90P2-204ENST00000419323 1075 ntBASIC2.88□□□□□ -1.95
CLK1P49759 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.88□□□□□ -1.95
CLK1P49759 AC005300.1-201ENST00000428401 373 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK1P49759 AC093156.1-201ENST00000440382 670 ntBASIC2.88□□□□□ -1.95
CLK1P49759 MTND4P25-201ENST00000441039 533 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC016691.1-201ENST00000441321 413 ntBASIC2.88□□□□□ -1.95
CLK1P49759 USP9YP8-201ENST00000441913 500 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK1P49759 AC011753.1-201ENST00000451001 220 ntBASIC2.88□□□□□ -1.95
CLK1P49759 CACYBPP2-201ENST00000453625 678 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC008481.1-201ENST00000463278 396 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AP004217.1-201ENST00000480579 346 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK1P49759 MRPL42P6-201ENST00000486397 371 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK1P49759 AC091951.2-201ENST00000500762 203 ntBASIC2.88□□□□□ -1.95
CLK1P49759 MTCO2P30-201ENST00000503662 364 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC091826.1-201ENST00000514065 313 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AF235103.2-201ENST00000525753 346 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AP000857.1-201ENST00000532151 543 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK1P49759 RPL21P12-201ENST00000559810 515 ntBASIC2.88□□□□□ -1.95
CLK1P49759 MTCO3P13-201ENST00000577757 781 ntBASIC2.88□□□□□ -1.95
CLK1P49759 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.88□□□□□ -1.95
CLK1P49759 YWHAEP7-203ENST00000622054 312 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
CLK1P49759 AC024614.3-201ENST00000637860 256 ntBASIC2.88□□□□□ -1.95
CLK1P49759 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.88□□□□□ -1.95
CLK1P49759 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLK1P49759 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.88□□□□□ -1.95
CLK1P49759 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
CLK1P49759 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLK1P49759 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CLK1P49759 Y_RNA.160-201ENST00000363677 92 ntBASIC2.87□□□□□ -1.95
CLK1P49759 Y_RNA.279-201ENST00000364763 95 ntBASIC2.87□□□□□ -1.95
CLK1P49759 Y_RNA.367-201ENST00000365544 101 ntBASIC2.87□□□□□ -1.95
CLK1P49759 SNORA69-201ENST00000383895 132 ntBASIC2.87□□□□□ -1.95
CLK1P49759 RNU1-52P-201ENST00000384190 164 ntBASIC2.87□□□□□ -1.95
CLK1P49759 RNA5SP171-201ENST00000391071 115 ntBASIC2.87□□□□□ -1.95
CLK1P49759 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLK1P49759 AL356776.1-201ENST00000406574 447 ntBASIC2.87□□□□□ -1.95
CLK1P49759 AC007560.1-201ENST00000426912 237 ntBASIC2.87□□□□□ -1.95
CLK1P49759 HMGB3P12-201ENST00000438745 556 ntBASIC2.87□□□□□ -1.95
CLK1P49759 CALM1P1-201ENST00000442082 433 ntBASIC2.87□□□□□ -1.95
CLK1P49759 AC079781.2-201ENST00000446424 169 ntBASIC2.87□□□□□ -1.95
CLK1P49759 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.87□□□□□ -1.95
CLK1P49759 AC108059.3-201ENST00000456388 214 ntBASIC2.87□□□□□ -1.95
CLK1P49759 AC022364.2-201ENST00000457963 554 ntBASIC2.87□□□□□ -1.95
CLK1P49759 RPL39P36-201ENST00000490784 156 ntBASIC2.87□□□□□ -1.95
CLK1P49759 AC026801.1-201ENST00000497178 464 ntBASIC2.87□□□□□ -1.95
CLK1P49759 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.87□□□□□ -1.95
CLK1P49759 AC018710.1-201ENST00000506509 158 ntBASIC2.87□□□□□ -1.95
CLK1P49759 AC074250.1-201ENST00000511117 192 ntBASIC2.87□□□□□ -1.95
CLK1P49759 RNA5SP367-201ENST00000516557 118 ntBASIC2.87□□□□□ -1.95
CLK1P49759 RN7SKP272-201ENST00000516988 232 ntBASIC2.87□□□□□ -1.95
CLK1P49759 RNU6-410P-201ENST00000517006 107 ntBASIC2.87□□□□□ -1.95
CLK1P49759 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms