Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MTND5P26-201ENST00000426018 1752 ntBASIC2.75□□□□□ -1.97
LHX1P48742 RNU6-1120P-201ENST00000362988 108 ntBASIC2.75□□□□□ -1.97
LHX1P48742 RNU6-259P-201ENST00000383999 107 ntBASIC2.75□□□□□ -1.97
LHX1P48742 RNU6-1103P-201ENST00000384150 107 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC023141.4-201ENST00000412031 328 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.75□□□□□ -1.97
LHX1P48742 AC007560.1-201ENST00000426912 237 ntBASIC2.75□□□□□ -1.97
LHX1P48742 VN1R108P-201ENST00000431580 830 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.75□□□□□ -1.97
LHX1P48742 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.75□□□□□ -1.97
LHX1P48742 RPS3P1-201ENST00000456781 192 ntBASIC2.75□□□□□ -1.97
LHX1P48742 RPS29P15-201ENST00000458329 171 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC026801.1-201ENST00000497178 464 ntBASIC2.75□□□□□ -1.97
LHX1P48742 EIF4EP3-201ENST00000498782 656 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.75□□□□□ -1.97
LHX1P48742 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.75□□□□□ -1.97
LHX1P48742 AC098591.2-201ENST00000510152 315 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC114781.4-201ENST00000513707 639 ntBASIC2.75□□□□□ -1.97
LHX1P48742 RNU6-572P-201ENST00000516724 80 ntBASIC2.75□□□□□ -1.97
LHX1P48742 RNU6-685P-201ENST00000517088 95 ntBASIC2.75□□□□□ -1.97
LHX1P48742 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.75□□□□□ -1.97
LHX1P48742 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LHX1P48742 FAM92A1P1-201ENST00000528023 890 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC243972.3-201ENST00000539655 198 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.75□□□□□ -1.97
LHX1P48742 MIR4782-201ENST00000577987 79 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.75□□□□□ -1.97
LHX1P48742 MIR4775-201ENST00000581168 75 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.75□□□□□ -1.97
LHX1P48742 AC008739.2-201ENST00000597006 317 ntBASIC2.75□□□□□ -1.97
LHX1P48742 DEFB131E-202ENST00000602581 683 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC025449.1-201ENST00000603896 529 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AL022154.1-201ENST00000604698 785 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.75□□□□□ -1.97
LHX1P48742 AC007684.1-201ENST00000609671 477 ntBASIC2.75□□□□□ -1.97
LHX1P48742 UCA1.1-201ENST00000620952 75 ntBASIC2.75□□□□□ -1.97
LHX1P48742 AL359740.1-201ENST00000624340 592 ntBASIC2.75□□□□□ -1.97
LHX1P48742 MIR3199-2-201ENST00000636243 86 ntBASIC2.75□□□□□ -1.97
LHX1P48742 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LHX1P48742 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.74□□□□□ -1.97
LHX1P48742 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
LHX1P48742 AL161431.1-201ENST00000618966 4205 ntBASIC2.74□□□□□ -1.97
LHX1P48742 RNU6-1287P-201ENST00000362914 107 ntBASIC2.74□□□□□ -1.97
LHX1P48742 Y_RNA.159-201ENST00000363674 87 ntBASIC2.74□□□□□ -1.97
LHX1P48742 RNU6-1060P-201ENST00000384664 107 ntBASIC2.74□□□□□ -1.97
LHX1P48742 MIR27B-201ENST00000385129 97 ntBASIC2.74□□□□□ -1.97
LHX1P48742 MTCO3P41-201ENST00000414801 328 ntBASIC2.74□□□□□ -1.97
LHX1P48742 OR51A5P-201ENST00000415429 942 ntBASIC2.74□□□□□ -1.97
LHX1P48742 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.74□□□□□ -1.97
LHX1P48742 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.74□□□□□ -1.97
LHX1P48742 AC003071.1-201ENST00000451219 789 ntBASIC2.74□□□□□ -1.97
LHX1P48742 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.74□□□□□ -1.97
LHX1P48742 AC006512.1-201ENST00000468816 291 ntBASIC2.74□□□□□ -1.97
LHX1P48742 RNA5SP503-201ENST00000517047 117 ntBASIC2.74□□□□□ -1.97
LHX1P48742 RNU6-1183P-201ENST00000517054 60 ntBASIC2.74□□□□□ -1.97
LHX1P48742 SNORA31.19-201ENST00000517079 126 ntBASIC2.74□□□□□ -1.97
LHX1P48742 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.74□□□□□ -1.97
LHX1P48742 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.74□□□□□ -1.97
LHX1P48742 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.74□□□□□ -1.97
LHX1P48742 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.74□□□□□ -1.97
LHX1P48742 AC010546.1-201ENST00000569391 485 ntBASIC2.74□□□□□ -1.97
LHX1P48742 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.74□□□□□ -1.97
LHX1P48742 AC069234.5-201ENST00000611056 416 ntBASIC2.74□□□□□ -1.97
LHX1P48742 HULC.1-201ENST00000612720 240 ntBASIC2.74□□□□□ -1.97
LHX1P48742 AP001486.3-201ENST00000615334 372 ntBASIC2.74□□□□□ -1.97
LHX1P48742 AC011155.2-201ENST00000623202 216 ntBASIC2.74□□□□□ -1.97
LHX1P48742 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LHX1P48742 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.74□□□□□ -1.97
LHX1P48742 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
LHX1P48742 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LHX1P48742 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.73□□□□□ -1.97
LHX1P48742 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.73□□□□□ -1.97
LHX1P48742 ADAM3A-203ENST00000461344 2157 ntBASIC2.73□□□□□ -1.97
LHX1P48742 ZNF680P1-201ENST00000436625 1469 ntBASIC2.73□□□□□ -1.97
LHX1P48742 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.73□□□□□ -1.97
LHX1P48742 Y_RNA.1-201ENST00000352915 104 ntBASIC2.73□□□□□ -1.97
LHX1P48742 RN7SKP226-201ENST00000364912 300 ntBASIC2.73□□□□□ -1.97
LHX1P48742 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.73□□□□□ -1.97
LHX1P48742 RNU6-116P-201ENST00000384042 109 ntBASIC2.73□□□□□ -1.97
LHX1P48742 RNU6-606P-201ENST00000384721 111 ntBASIC2.73□□□□□ -1.97
LHX1P48742 RNU4-55P-201ENST00000410731 137 ntBASIC2.73□□□□□ -1.97
LHX1P48742 RNU6-193P-201ENST00000410977 107 ntBASIC2.73□□□□□ -1.97
LHX1P48742 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.73□□□□□ -1.97
LHX1P48742 MTCYBP5-201ENST00000423752 1135 ntBASIC2.73□□□□□ -1.97
LHX1P48742 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.73□□□□□ -1.97
LHX1P48742 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.73□□□□□ -1.97
LHX1P48742 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.73□□□□□ -1.97
LHX1P48742 RPL23AP58-201ENST00000440453 469 ntBASIC2.73□□□□□ -1.97
LHX1P48742 MRPL50P4-201ENST00000446432 475 ntBASIC2.73□□□□□ -1.97
LHX1P48742 AC104058.1-201ENST00000448028 297 ntBASIC2.73□□□□□ -1.97
LHX1P48742 RPS15AP27-201ENST00000449183 343 ntBASIC2.73□□□□□ -1.97
LHX1P48742 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.73□□□□□ -1.97
LHX1P48742 AL162395.1-201ENST00000457882 422 ntBASIC2.73□□□□□ -1.97
LHX1P48742 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.73□□□□□ -1.97
LHX1P48742 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.73□□□□□ -1.97
LHX1P48742 MTND2P33-201ENST00000506452 1031 ntBASIC2.73□□□□□ -1.97
LHX1P48742 RNA5SP148-201ENST00000516527 94 ntBASIC2.73□□□□□ -1.97
LHX1P48742 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.73□□□□□ -1.97
LHX1P48742 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.73□□□□□ -1.97
LHX1P48742 MIR548AC-201ENST00000585049 88 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms