Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 USP9YP27-201ENST00000418455 438 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.88□□□□□ -2.11
CXCL12P48061 AL358075.3-201ENST00000426289 226 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.88□□□□□ -2.11
CXCL12P48061 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.88□□□□□ -2.11
CXCL12P48061 AL445687.1-201ENST00000439946 251 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC092473.1-201ENST00000441098 221 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC118469.1-201ENST00000442943 488 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 TAF9P1-201ENST00000445421 515 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL12P48061 TAF9P2-201ENST00000454958 515 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC104435.1-201ENST00000483483 166 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AF131216.2-201ENST00000512316 564 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC107393.1-201ENST00000512403 346 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL12P48061 SNORA31.3-201ENST00000516029 96 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 RNU6-250P-201ENST00000516958 103 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC107934.1-201ENST00000522215 217 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 MTND4LP18-201ENST00000526864 291 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL12P48061 ZNF519P3-201ENST00000557158 1032 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
CXCL12P48061 AC091489.2-201ENST00000566263 604 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 MTATP6P24-201ENST00000576835 677 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.88□□□□□ -2.11
CXCL12P48061 OR1M4P-201ENST00000589199 287 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC005498.1-201ENST00000592125 465 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CXCL12P48061 MIR8081-201ENST00000611533 95 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AC068057.2-201ENST00000624047 895 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.88□□□□□ -2.11
CXCL12P48061 U2.21-201ENST00000637295 81 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CXCL12P48061 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.87□□□□□ -2.11
CXCL12P48061 RNU5F-6P-201ENST00000362979 116 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 RNU6-778P-201ENST00000363269 103 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 Y_RNA.118-201ENST00000363300 101 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 RNU6-501P-201ENST00000364072 100 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.87□□□□□ -2.11
CXCL12P48061 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CXCL12P48061 MTCYBP36-201ENST00000404146 440 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 RNU4-72P-201ENST00000410754 173 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 RNU2-68P-201ENST00000410878 191 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.87□□□□□ -2.11
CXCL12P48061 BPY2DP-201ENST00000422208 265 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.87□□□□□ -2.11
CXCL12P48061 AL353777.1-201ENST00000425552 326 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC104651.1-201ENST00000427559 735 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL12P48061 AL365184.2-201ENST00000431139 435 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 GPM6BP2-201ENST00000432046 144 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 RPL22P17-201ENST00000438729 315 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.87□□□□□ -2.11
CXCL12P48061 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL12P48061 IPO7P1-201ENST00000442031 636 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 GPM6BP1-201ENST00000446387 144 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 DPPA3P1-201ENST00000448050 469 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.87□□□□□ -2.11
CXCL12P48061 KPNA2P1-201ENST00000458289 1591 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CXCL12P48061 AC007182.2-201ENST00000489251 402 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC079804.2-201ENST00000490376 200 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL12P48061 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.87□□□□□ -2.11
CXCL12P48061 RNU6-1129P-201ENST00000515964 104 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 RNU6-201P-201ENST00000517100 61 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC022616.6-201ENST00000520479 119 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CXCL12P48061 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CXCL12P48061 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CXCL12P48061 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL12P48061 ARL2BPP2-201ENST00000550907 489 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC002400.1-201ENST00000569310 726 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC009127.3-201ENST00000570531 403 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 RPS15AP11-201ENST00000594193 385 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC009314.1-201ENST00000603871 304 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC105129.3-201ENST00000605455 485 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AL121917.1-203ENST00000605534 577 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC245884.12-201ENST00000615364 59 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL12P48061 MIR8070-201ENST00000616510 88 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AP002791.1-201ENST00000623291 381 ntBASIC1.87□□□□□ -2.11
CXCL12P48061 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.87□□□□□ -2.11
CXCL12P48061 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
CXCL12P48061 SNORA38-201ENST00000363946 132 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 RNU6-533P-201ENST00000384144 107 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CXCL12P48061 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CXCL12P48061 RNU2-36P-201ENST00000410361 191 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.86□□□□□ -2.11
CXCL12P48061 ZNF90P2-204ENST00000419323 1075 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC098614.2-201ENST00000426040 255 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 ISCA1P1-201ENST00000426679 387 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC093106.2-201ENST00000428212 385 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CXCL12P48061 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.86□□□□□ -2.11
CXCL12P48061 AL512286.1-201ENST00000439244 400 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms