Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC060780.3-201ENST00000589464 80 ntBASIC2.85□□□□□ -1.95
APOBEC1P41238 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBEC1P41238 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBEC1P41238 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.85□□□□□ -1.95
APOBEC1P41238 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBEC1P41238 AC018692.3-201ENST00000623929 123 ntBASIC2.85□□□□□ -1.95
APOBEC1P41238 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
APOBEC1P41238 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
APOBEC1P41238 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBEC1P41238 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBEC1P41238 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
APOBEC1P41238 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
APOBEC1P41238 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.84□□□□□ -1.95
APOBEC1P41238 SNORA14A-201ENST00000364773 135 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 SNORA7.4-201ENST00000384249 137 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 RNU6-166P-201ENST00000384371 107 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 RNA5SP219-201ENST00000390940 113 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 RNU1-101P-201ENST00000391171 127 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 RNU6-607P-201ENST00000411283 108 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 POLHP1-201ENST00000411806 470 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 AC009161.1-201ENST00000417306 376 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBEC1P41238 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBEC1P41238 AL627311.1-201ENST00000431514 115 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.84□□□□□ -1.95
APOBEC1P41238 HMGB1P31-201ENST00000437242 427 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.84□□□□□ -1.95
APOBEC1P41238 RNU6-1208P-201ENST00000459588 107 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 RPS29P20-201ENST00000489592 171 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBEC1P41238 RPS27AP10-201ENST00000496103 208 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 MTCYBP18-201ENST00000501056 747 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 AC114786.4-201ENST00000508771 728 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 HIGD1AP13-201ENST00000509878 289 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 MIR892C-201ENST00000516410 77 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 RNU6-1183P-201ENST00000517054 60 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 RNA5SP380-201ENST00000517190 98 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.84□□□□□ -1.95
APOBEC1P41238 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBEC1P41238 SRGNP1-201ENST00000603392 451 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBEC1P41238 AC092807.2-201ENST00000609367 243 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 MIR7112-201ENST00000616126 65 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 AL031601.2-202ENST00000622650 282 ntBASIC2.84□□□□□ -1.95
APOBEC1P41238 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.84□□□□□ -1.95
APOBEC1P41238 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.84□□□□□ -1.96
APOBEC1P41238 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
APOBEC1P41238 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBEC1P41238 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBEC1P41238 AL079305.1-201ENST00000623159 3008 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBEC1P41238 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBEC1P41238 SNORD3E-201ENST00000362899 217 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 SNORA38.1-201ENST00000364172 131 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 Y_RNA.378-201ENST00000365652 113 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 FGF7P8-201ENST00000402994 292 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBEC1P41238 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBEC1P41238 TOMM20P4-201ENST00000427861 435 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBEC1P41238 CYCSP32-201ENST00000440548 321 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBEC1P41238 HMGN2P26-201ENST00000463169 339 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 DYNLL1P5-201ENST00000467158 270 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBEC1P41238 RPL21P93-201ENST00000480465 489 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 AC116353.2-201ENST00000505332 712 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBEC1P41238 AC010265.1-201ENST00000513509 211 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 RNU6-189P-201ENST00000516120 101 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 SNORA31.21-201ENST00000517180 77 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBEC1P41238 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBEC1P41238 AL118558.2-201ENST00000556294 238 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 LINC00933-203ENST00000559812 219 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 LRRC37A5P-203ENST00000580181 585 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 HMGN2P15-201ENST00000585707 270 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBEC1P41238 AC024220.1-201ENST00000603675 484 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 AC092747.3-201ENST00000603769 301 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 BNIP3P10-201ENST00000605360 577 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 AC107294.3-201ENST00000609211 526 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 AC006504.8-201ENST00000621046 635 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBEC1P41238 CASC19-280ENST00000642102 1351 ntBASIC2.83□□□□□ -1.96
APOBEC1P41238 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBEC1P41238 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
APOBEC1P41238 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
APOBEC1P41238 AC110491.1-201ENST00000562191 2010 ntBASIC2.82□□□□□ -1.96
APOBEC1P41238 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBEC1P41238 Y_RNA.373-201ENST00000365600 103 ntBASIC2.82□□□□□ -1.96
APOBEC1P41238 MIR34A-201ENST00000385130 110 ntBASIC2.82□□□□□ -1.96
APOBEC1P41238 SNORA11-201ENST00000408789 128 ntBASIC2.82□□□□□ -1.96
APOBEC1P41238 Y_RNA.615-201ENST00000410769 117 ntBASIC2.82□□□□□ -1.96
APOBEC1P41238 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBEC1P41238 RPL7P10-201ENST00000417407 739 ntBASIC2.82□□□□□ -1.96
APOBEC1P41238 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBEC1P41238 BPY2DP-201ENST00000422208 265 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms