Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HNF4AP41235 AC092325.1-201ENST00000566449 554 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.81□□□□□ -1.96
HNF4AP41235 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.81□□□□□ -1.96
HNF4AP41235 AC090115.4-201ENST00000609970 188 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AC139792.3-201ENST00000623525 224 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AC009161.2-201ENST00000624626 138 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 MTND4P27-201ENST00000450813 1354 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.81□□□□□ -1.96
HNF4AP41235 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.81□□□□□ -1.96
HNF4AP41235 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.81□□□□□ -1.96
HNF4AP41235 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.8□□□□□ -1.96
HNF4AP41235 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.8□□□□□ -1.96
HNF4AP41235 Y_RNA.22-201ENST00000362492 102 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 RNU6-108P-201ENST00000365558 107 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 SNORA9-201ENST00000384215 133 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 RNU6-74P-201ENST00000384235 107 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 MIR1-2-201ENST00000384961 85 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 RNU6-817P-201ENST00000391083 104 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 RNU2-36P-201ENST00000410361 191 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.8□□□□□ -1.96
HNF4AP41235 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 GPR143P-201ENST00000434155 205 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 RPL36AP6-201ENST00000435770 321 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 RPS24P13-201ENST00000442520 397 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.8□□□□□ -1.96
HNF4AP41235 NEFMP1-201ENST00000443423 1006 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.8□□□□□ -1.96
HNF4AP41235 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.8□□□□□ -1.96
HNF4AP41235 MTCO3P38-201ENST00000468910 766 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC090096.1-201ENST00000489168 390 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.8□□□□□ -1.96
HNF4AP41235 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.8□□□□□ -1.96
HNF4AP41235 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.8□□□□□ -1.96
HNF4AP41235 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.8□□□□□ -1.96
HNF4AP41235 AP006587.4-201ENST00000526053 529 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC021739.1-201ENST00000559631 174 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 HMGB1P33-201ENST00000563485 527 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 MIR4325-201ENST00000583049 90 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC098848.2-201ENST00000588023 330 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC012507.3-201ENST00000603556 477 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AL670379.6-201ENST00000603753 252 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AL670379.11-201ENST00000604059 253 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AC008162.1-201ENST00000604718 254 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AL670379.1-201ENST00000604752 252 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AL670379.5-201ENST00000605253 252 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AL670379.12-201ENST00000605291 253 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AL670379.8-201ENST00000605353 252 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AL670379.7-201ENST00000605823 252 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.8□□□□□ -1.96
HNF4AP41235 AL020991.1-201ENST00000612314 373 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.8□□□□□ -1.96
HNF4AP41235 AC091953.5-201ENST00000622919 233 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 FRG1KP-201ENST00000623592 341 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 MIR7157-201ENST00000635801 60 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 MIR3688-2-201ENST00000636963 87 ntBASIC2.8□□□□□ -1.96
HNF4AP41235 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HNF4AP41235 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HNF4AP41235 MAPK10-266ENST00000641066 6555 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 Y_RNA.9-201ENST00000362354 101 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RNY4P14-201ENST00000363656 96 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RNU6-701P-201ENST00000384059 107 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RNU6-483P-201ENST00000384088 108 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RNU6-1072P-201ENST00000384703 107 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RNU6-443P-201ENST00000384780 107 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 MIR512-1-201ENST00000384913 84 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 MIR181B1-201ENST00000385240 110 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RPS4XP8-201ENST00000402039 771 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 CIR1P3-201ENST00000405137 479 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RNU6-1328P-201ENST00000410938 106 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 MTATP6P18-201ENST00000417994 673 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RAC1P6-201ENST00000423911 575 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.79□□□□□ -1.96
HNF4AP41235 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.79□□□□□ -1.96
HNF4AP41235 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.79□□□□□ -1.96
HNF4AP41235 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 RNU7-26P-201ENST00000458980 63 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 SNORD97-201ENST00000459187 142 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RPL23AP11-201ENST00000475260 469 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RPS27AP9-201ENST00000477681 438 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.79□□□□□ -1.96
HNF4AP41235 GZMAP1-201ENST00000503054 631 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 AC083906.5-201ENST00000503722 328 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 FAM92A1P2-202ENST00000504766 877 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 Y_RNA.693-201ENST00000516641 110 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 RNU6-703P-201ENST00000516946 107 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 BTF3P12-201ENST00000519620 469 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 HMGB1P41-201ENST00000520234 440 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 AP003034.1-201ENST00000534621 422 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 AL512360.1-201ENST00000555346 234 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 AL133241.1-201ENST00000556832 487 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 AC023824.2-201ENST00000566185 400 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms