Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC004520.1-201ENST00000608362 1413 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SHMT2P34897 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.12□□□□□ -2.07
SHMT2P34897 RNU6-1083P-201ENST00000384022 107 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 SNORA70B-201ENST00000384210 135 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 RNU6-39P-201ENST00000384344 107 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 SNORA11.4-201ENST00000408823 129 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 AL589872.1-201ENST00000426602 288 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 AL591704.1-201ENST00000432574 275 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 RPL7P34-201ENST00000433316 712 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 MTND1P30-201ENST00000441241 901 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 UBE2D3P4-201ENST00000441973 436 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 BRK1P2-201ENST00000442875 223 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 AL139824.2-201ENST00000458731 1095 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 AL121769.1-201ENST00000469473 401 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 SCARNA16.3-201ENST00000516595 184 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 RNU6-914P-201ENST00000516749 109 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 RNU6-1315P-201ENST00000517187 99 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.12□□□□□ -2.07
SHMT2P34897 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.12□□□□□ -2.07
SHMT2P34897 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.12□□□□□ -2.07
SHMT2P34897 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.12□□□□□ -2.07
SHMT2P34897 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.12□□□□□ -2.07
SHMT2P34897 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 MIR5694-201ENST00000581190 76 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.12□□□□□ -2.07
SHMT2P34897 AC008121.1-201ENST00000603244 268 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 AC091152.3-201ENST00000604227 325 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 AC080128.1-201ENST00000474389 1917 ntBASIC2.12□□□□□ -2.07
SHMT2P34897 MTND4P4-201ENST00000439033 1366 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHMT2P34897 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SHMT2P34897 AC010329.5-201ENST00000623497 2174 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 U8.2-201ENST00000363156 134 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 SNORD56.2-201ENST00000363242 71 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.11□□□□□ -2.07
SHMT2P34897 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.11□□□□□ -2.07
SHMT2P34897 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.11□□□□□ -2.07
SHMT2P34897 AC119618.1-201ENST00000434191 222 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.11□□□□□ -2.07
SHMT2P34897 AL445567.1-201ENST00000439121 144 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AL161651.1-201ENST00000440882 223 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC096638.1-201ENST00000444678 216 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.11□□□□□ -2.07
SHMT2P34897 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.11□□□□□ -2.07
SHMT2P34897 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.11□□□□□ -2.07
SHMT2P34897 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.11□□□□□ -2.07
SHMT2P34897 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.11□□□□□ -2.07
SHMT2P34897 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 RAP1BP2-201ENST00000478270 544 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.11□□□□□ -2.07
SHMT2P34897 AC109927.2-201ENST00000506416 303 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 RNU6-143P-201ENST00000516942 93 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.11□□□□□ -2.07
SHMT2P34897 BTF3P12-201ENST00000519620 469 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.11□□□□□ -2.07
SHMT2P34897 OR5B19P-201ENST00000531766 928 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.11□□□□□ -2.07
SHMT2P34897 RPL21P5-201ENST00000554662 472 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AL121821.2-201ENST00000556081 394 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.11□□□□□ -2.07
SHMT2P34897 MIR3915-201ENST00000578518 97 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC009977.1-201ENST00000586015 570 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.11□□□□□ -2.07
SHMT2P34897 AC012360.2-201ENST00000609349 391 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC091304.9-201ENST00000612091 226 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC091304.6-201ENST00000619761 202 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.11□□□□□ -2.07
SHMT2P34897 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.11□□□□□ -2.07
SHMT2P34897 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.11□□□□□ -2.07
SHMT2P34897 CDC27P3-201ENST00000635418 1910 ntBASIC2.11□□□□□ -2.07
SHMT2P34897 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
SHMT2P34897 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SHMT2P34897 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHMT2P34897 SNORA4.3-201ENST00000365564 137 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.1□□□□□ -2.07
SHMT2P34897 AC093899.1-201ENST00000457984 376 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 AC090096.1-201ENST00000489168 390 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.1□□□□□ -2.07
SHMT2P34897 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.1□□□□□ -2.07
SHMT2P34897 Y_RNA.672-201ENST00000516289 104 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 AC025755.1-201ENST00000521306 278 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.1□□□□□ -2.07
SHMT2P34897 AC145350.1-201ENST00000567426 208 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 AC109446.2-201ENST00000567872 497 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.1□□□□□ -2.07
SHMT2P34897 LRRC37A5P-203ENST00000580181 585 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.1□□□□□ -2.07
SHMT2P34897 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.1□□□□□ -2.07
SHMT2P34897 AC174048.1-201ENST00000603389 144 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.1□□□□□ -2.07
SHMT2P34897 MIR6134-201ENST00000617606 109 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms