Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC13P31276 AC123904.2-201ENST00000548059 300 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC13P31276 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC13P31276 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC13P31276 MIR3117-201ENST00000584034 78 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 HMGN2P15-201ENST00000585707 270 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 AL121655.1-201ENST00000605811 308 ntBASIC3.05□□□□□ -1.92
HOXC13P31276 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC13P31276 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HOXC13P31276 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC13P31276 AL359693.1-201ENST00000614959 2407 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC13P31276 AC010329.5-201ENST00000623497 2174 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC13P31276 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC13P31276 Y_RNA.9-201ENST00000362354 101 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 RNY3P13-201ENST00000365542 102 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 Y_RNA.509-201ENST00000384506 99 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 NUP35P1-201ENST00000422734 947 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC13P31276 HMGB1P27-201ENST00000431429 603 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 FCF1P1-201ENST00000432690 571 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 RPS15AP5-201ENST00000436276 388 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 AC007677.1-201ENST00000445757 515 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC13P31276 RPL12P25-201ENST00000455592 494 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 AC105252.1-201ENST00000503089 286 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXC13P31276 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HOXC13P31276 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC13P31276 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
HOXC13P31276 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC13P31276 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC13P31276 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC13P31276 UBE2V2P2-201ENST00000587677 504 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 DPPA3P3-201ENST00000603842 430 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 AC091834.1-201ENST00000614543 472 ntBASIC3.04□□□□□ -1.92
HOXC13P31276 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
HOXC13P31276 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC13P31276 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC13P31276 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXC13P31276 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXC13P31276 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXC13P31276 RNU6-1167P-201ENST00000363227 94 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 Y_RNA.162-201ENST00000363683 102 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 RNU6-533P-201ENST00000384144 107 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 RNU6-692P-201ENST00000384496 107 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 RN7SKP58-201ENST00000411010 305 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXC13P31276 EEF1A1P40-201ENST00000412883 573 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC13P31276 AF228730.4-201ENST00000421457 183 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 ELOCP14-201ENST00000428070 331 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 MYL8P-204ENST00000431574 518 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 ELOCP7-201ENST00000439968 331 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 OSTCP8-201ENST00000445117 448 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 MTND1P18-201ENST00000448191 573 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 SCGB1D5P-201ENST00000515134 247 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 Y_RNA.701-201ENST00000516812 110 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC13P31276 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXC13P31276 AC091544.4-201ENST00000555268 342 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC13P31276 AC104984.5-201ENST00000586878 94 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 FRG1KP-201ENST00000623592 341 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 AC124864.2-201ENST00000624736 186 ntBASIC3.03□□□□□ -1.92
HOXC13P31276 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC13P31276 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC13P31276 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HOXC13P31276 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC13P31276 VTRNA1-1-201ENST00000363120 99 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 RNU6-884P-201ENST00000363889 107 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 RNU6-1090P-201ENST00000364065 94 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 SNORA9.2-201ENST00000365361 133 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 Y_RNA.356-201ENST00000365475 113 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 AC023141.4-201ENST00000412031 328 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 NDUFS5P4-201ENST00000412983 318 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC13P31276 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC13P31276 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXC13P31276 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC13P31276 AC244505.5-201ENST00000443639 207 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC13P31276 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC13P31276 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXC13P31276 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC13P31276 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXC13P31276 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC13P31276 MIR3913-1-201ENST00000577744 102 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 ELOCP29-201ENST00000588193 334 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 AC104763.2-201ENST00000604179 382 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC13P31276 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC13P31276 AC010338.1-201ENST00000621823 717 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 MIR6863-201ENST00000636112 90 ntBASIC3.02□□□□□ -1.93
HOXC13P31276 MIR7515-201ENST00000637837 67 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms