Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL109933.3-201ENST00000619095 188 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AL031601.2-202ENST00000622650 282 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AL589743.1-201ENST00000551932 2712 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COL4A5P29400 AL359854.1-201ENST00000614203 1594 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A5P29400 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.22□□□□□ -2.21
COL4A5P29400 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A5P29400 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A5P29400 RNU6-716P-201ENST00000365621 103 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.22□□□□□ -2.21
COL4A5P29400 RNU6-1122P-201ENST00000384449 107 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 TPMTP2-201ENST00000414372 726 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A5P29400 AC007435.1-201ENST00000421086 415 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.22□□□□□ -2.21
COL4A5P29400 MTCO3P43-201ENST00000440974 771 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A5P29400 RPS27P1-201ENST00000450552 247 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A5P29400 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.22□□□□□ -2.21
COL4A5P29400 MRPS17P9-201ENST00000511924 393 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 CBX3P8-201ENST00000532412 525 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 CBX3P7-201ENST00000532876 502 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 CYCSP2-201ENST00000558168 301 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AC002545.1-201ENST00000592511 181 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A5P29400 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A5P29400 AL021997.1-201ENST00000605757 193 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AL121652.1-201ENST00000608851 448 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AP001486.3-201ENST00000615334 372 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AC078880.5-201ENST00000617845 421 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AL162373.1-201ENST00000620433 407 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AC079416.3-201ENST00000624479 549 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AC107982.1-201ENST00000507171 1300 ntBASIC1.22□□□□□ -2.21
COL4A5P29400 AC110491.1-201ENST00000562191 2010 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 RNU6-792P-201ENST00000363490 107 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 RNU6-432P-201ENST00000384196 109 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 MIR532-201ENST00000385025 91 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 MIR513A1-201ENST00000385138 129 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 MIR561-201ENST00000385216 97 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 SNORA40.19-201ENST00000390846 128 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 OR51A5P-201ENST00000415429 942 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A5P29400 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.21□□□□□ -2.22
COL4A5P29400 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.21□□□□□ -2.22
COL4A5P29400 GDI2P2-201ENST00000445131 608 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A5P29400 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.21□□□□□ -2.22
COL4A5P29400 RPS27P21-201ENST00000486977 252 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.21□□□□□ -2.22
COL4A5P29400 SNORA31.25-201ENST00000517242 134 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 NRON-201ENST00000517270 370 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 AC023632.1-201ENST00000518463 375 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 NDUFS5P6-201ENST00000529136 295 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A5P29400 IMMP1LP2-201ENST00000552954 492 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 AL133241.1-201ENST00000556832 487 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A5P29400 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A5P29400 AL355297.2-201ENST00000604792 129 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 MIR8084-201ENST00000614105 89 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 AL357080.1-201ENST00000617394 239 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 AC092140.2-201ENST00000618027 521 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A5P29400 MIR1322-201ENST00000638013 71 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 AL138713.1-201ENST00000624026 2130 ntBASIC1.21□□□□□ -2.22
COL4A5P29400 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A5P29400 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A5P29400 RNU5B-1-201ENST00000363286 116 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 RNU5E-8P-201ENST00000363502 116 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 MTCO1P56-201ENST00000401674 224 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL356421.1-201ENST00000403255 413 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 EDDM3CP-201ENST00000415977 425 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A5P29400 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A5P29400 AC098831.1-201ENST00000440661 216 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL353718.1-201ENST00000451028 517 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A5P29400 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A5P29400 PMCHL2-203ENST00000457791 237 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A5P29400 RNU2-44P-201ENST00000516795 194 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A5P29400 MTCO3P15-201ENST00000526563 574 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 HSPE1P4-201ENST00000550617 308 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AP001269.3-201ENST00000588718 329 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AC011939.3-201ENST00000613686 466 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 SDR42E1P2-201ENST00000614861 481 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AC084824.4-201ENST00000620106 731 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 SDR42E1P4-201ENST00000620894 481 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A5P29400 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A5P29400 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A5P29400 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
COL4A5P29400 RNU1-62P-201ENST00000362599 164 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 Y_RNA.85-201ENST00000363014 111 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms