Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC008250.2-201ENST00000615261 205 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.47□□□□□ -2.01
PTPN4P29074 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
PTPN4P29074 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PTPN4P29074 SNORD62.1-201ENST00000362541 86 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 XGY1-201ENST00000381172 446 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 RNU6-14P-201ENST00000384630 106 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 SNORA67.4-201ENST00000384688 142 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 RNU6-248P-201ENST00000410720 107 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.46□□□□□ -2.02
PTPN4P29074 USP9YP27-201ENST00000418455 438 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.46□□□□□ -2.02
PTPN4P29074 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.46□□□□□ -2.02
PTPN4P29074 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.46□□□□□ -2.02
PTPN4P29074 AL591212.2-201ENST00000433923 257 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.46□□□□□ -2.02
PTPN4P29074 HMGN2P10-201ENST00000448085 265 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 RPL31P3-201ENST00000458430 332 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 snoU109.1-201ENST00000459339 135 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 TRBV1-201ENST00000476502 284 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 RPL37P25-201ENST00000507308 276 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 AC008413.1-201ENST00000511864 177 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.46□□□□□ -2.02
PTPN4P29074 AC117532.1-201ENST00000514638 323 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.46□□□□□ -2.02
PTPN4P29074 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.46□□□□□ -2.02
PTPN4P29074 AC021739.1-201ENST00000559631 174 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 AC073544.2-201ENST00000601155 540 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.46□□□□□ -2.02
PTPN4P29074 AL391813.1-201ENST00000603098 260 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 AP001506.1-201ENST00000615444 211 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 HMGB1P24-202ENST00000615653 685 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.46□□□□□ -2.02
PTPN4P29074 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.46□□□□□ -2.02
PTPN4P29074 MTND4P35-201ENST00000604257 1375 ntBASIC2.46□□□□□ -2.02
PTPN4P29074 Z82209.1-201ENST00000422141 2135 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
PTPN4P29074 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
PTPN4P29074 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PTPN4P29074 SNORD56.2-201ENST00000363242 71 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 SNORD116-9-201ENST00000384000 95 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 SNORD116-3-201ENST00000384287 95 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 SNORD116-7-201ENST00000384404 95 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 SNORD116-5-201ENST00000384462 95 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 RNU6-658P-201ENST00000384606 106 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PTPN4P29074 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PTPN4P29074 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PTPN4P29074 MICF-203ENST00000432679 129 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.45□□□□□ -2.02
PTPN4P29074 AC009961.2-201ENST00000435771 251 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AL031667.1-201ENST00000440222 725 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.45□□□□□ -2.02
PTPN4P29074 GAPDHP17-201ENST00000449858 1001 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.45□□□□□ -2.02
PTPN4P29074 AL139109.1-201ENST00000455491 297 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.45□□□□□ -2.02
PTPN4P29074 GZMAP1-201ENST00000503054 631 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AC093534.1-201ENST00000504977 132 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.45□□□□□ -2.02
PTPN4P29074 AP003122.3-201ENST00000526316 255 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AC084851.1-201ENST00000529105 249 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AL512310.1-201ENST00000548639 172 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.45□□□□□ -2.02
PTPN4P29074 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.45□□□□□ -2.02
PTPN4P29074 MIR4782-201ENST00000577987 79 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 PIGPP4-201ENST00000584447 307 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.45□□□□□ -2.02
PTPN4P29074 SEPT7P9-203ENST00000604116 343 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AP002360.4-201ENST00000606980 481 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 uc_338.14-201ENST00000613162 166 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 AL359547.2-201ENST00000615810 418 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PTPN4P29074 CTSLP2-204ENST00000629029 392 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 MIR203B-201ENST00000636080 86 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.45□□□□□ -2.02
PTPN4P29074 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
PTPN4P29074 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
PTPN4P29074 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PTPN4P29074 RNY4P34-201ENST00000364779 95 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 SMIM11P1-201ENST00000369586 178 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PTPN4P29074 RNU6-946P-201ENST00000383878 107 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.44□□□□□ -2.02
PTPN4P29074 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PTPN4P29074 AC007560.1-201ENST00000426912 237 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 AC093106.2-201ENST00000428212 385 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 AL592045.1-201ENST00000429867 352 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 AC104850.1-201ENST00000435940 476 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 MTCO2P16-201ENST00000436962 677 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 RPS24P1-201ENST00000438550 371 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 USP9YP29-201ENST00000445112 563 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 AL136380.1-201ENST00000447970 162 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.44□□□□□ -2.02
PTPN4P29074 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.44□□□□□ -2.02
PTPN4P29074 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.44□□□□□ -2.02
PTPN4P29074 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.44□□□□□ -2.02
PTPN4P29074 AC093899.1-201ENST00000457984 376 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms