Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MIR22-201ENST00000362190 85 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 RNU6-379P-201ENST00000363813 104 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 Y_RNA.212-201ENST00000364177 102 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 RNU6-907P-201ENST00000390924 102 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
POLR2AP24928 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.67□□□□□ -1.82
POLR2AP24928 U8.20-201ENST00000459445 131 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 AC008526.1-201ENST00000509149 338 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.67□□□□□ -1.82
POLR2AP24928 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.67□□□□□ -1.82
POLR2AP24928 AL138889.2-201ENST00000603883 242 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 AL031176.1-201ENST00000604554 466 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 MIR4727-201ENST00000622232 55 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 MIR4275-201ENST00000636486 87 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
POLR2AP24928 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
POLR2AP24928 AC000403.1-201ENST00000613696 3585 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 TPTE2P4-201ENST00000258589 1605 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
POLR2AP24928 RNU6-188P-201ENST00000364207 107 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 RNU6-1105P-201ENST00000384774 107 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 MIR450B-201ENST00000401182 78 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 RNU6-603P-201ENST00000411403 107 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR2AP24928 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR2AP24928 RPL7P46-201ENST00000425129 740 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR2AP24928 AC114801.2-201ENST00000503825 781 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR2AP24928 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR2AP24928 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR2AP24928 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR2AP24928 MIR4512-201ENST00000583257 77 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR2AP24928 AC007485.1-201ENST00000616755 206 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 AL606534.2-204ENST00000635008 178 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 ZNF826P-207ENST00000622273 1910 ntBASIC3.66□□□□□ -1.82
POLR2AP24928 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
POLR2AP24928 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR2AP24928 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
POLR2AP24928 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
POLR2AP24928 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
POLR2AP24928 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR2AP24928 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.65□□□□□ -1.82
POLR2AP24928 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
POLR2AP24928 XIAPP3-201ENST00000312918 795 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 RNA5SP391-201ENST00000363456 119 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 Y_RNA.176-201ENST00000363815 109 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 Y_RNA.188-201ENST00000363952 111 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 RNU6-960P-201ENST00000364056 120 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 MIR93-201ENST00000385024 80 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 RNU6-550P-201ENST00000391057 101 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AL139039.1-201ENST00000401900 692 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AL591704.1-201ENST00000432574 275 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AL353597.2-202ENST00000434901 373 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AC097473.1-201ENST00000508142 408 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 RNU6-685P-201ENST00000517088 95 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 HMGN1P28-201ENST00000521340 364 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.65□□□□□ -1.82
POLR2AP24928 AP002404.1-201ENST00000532005 451 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.65□□□□□ -1.82
POLR2AP24928 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.65□□□□□ -1.82
POLR2AP24928 AF038458.1-201ENST00000588406 262 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AC067852.4-201ENST00000590314 478 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AC073539.2-201ENST00000597113 165 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AC104763.2-201ENST00000604179 382 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AC090425.1-201ENST00000610007 140 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AL590808.1-201ENST00000618696 141 ntBASIC3.65□□□□□ -1.82
POLR2AP24928 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
POLR2AP24928 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.65□□□□□ -1.82
POLR2AP24928 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
POLR2AP24928 RNU6-821P-201ENST00000390995 107 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 MIR1302-3-201ENST00000408128 138 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 RNU4-65P-201ENST00000410473 140 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC126124.2-201ENST00000413542 321 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 RPLP0P7-201ENST00000416050 667 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.65□□□□□ -1.83
POLR2AP24928 AC139712.2-201ENST00000424302 339 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.65□□□□□ -1.83
POLR2AP24928 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.65□□□□□ -1.83
POLR2AP24928 FABP5P13-201ENST00000452144 328 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC234775.1-201ENST00000454247 670 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 RNU7-138P-201ENST00000459479 64 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC010683.1-201ENST00000473673 378 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.65□□□□□ -1.83
POLR2AP24928 AC026782.1-201ENST00000512952 449 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 RNU6-976P-201ENST00000516086 111 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 RNU1-143P-201ENST00000516296 146 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 RNU6-699P-201ENST00000517081 110 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 SNORA31.21-201ENST00000517180 77 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.65□□□□□ -1.83
POLR2AP24928 AL133271.1-201ENST00000538229 291 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.65□□□□□ -1.83
POLR2AP24928 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.65□□□□□ -1.83
POLR2AP24928 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
POLR2AP24928 AL139395.1-201ENST00000603662 160 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC004832.5-201ENST00000608677 401 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 U1.23-201ENST00000610293 146 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC116447.1-201ENST00000613153 453 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AC034102.8-201ENST00000615146 484 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms