Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU4-5P-201ENST00000607255 135 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AL773524.1-201ENST00000614065 229 ntBASIC-0.06□□□□□ -2.42
VCANP13611 MIR587-201ENST00000384845 96 ntBASIC-0.07□□□□□ -2.42
VCANP13611 AL355615.1-201ENST00000406187 641 ntBASIC-0.07□□□□□ -2.42
VCANP13611 ARL2BPP3-201ENST00000421226 480 ntBASIC-0.07□□□□□ -2.42
VCANP13611 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.07□□□□□ -2.42
VCANP13611 AC099513.1-201ENST00000490423 301 ntBASIC-0.07□□□□□ -2.42
VCANP13611 MIR3117-201ENST00000584034 78 ntBASIC-0.07□□□□□ -2.42
VCANP13611 LARP7P1-201ENST00000605576 316 ntBASIC-0.07□□□□□ -2.42
VCANP13611 AC009950.2-201ENST00000636548 183 ntBASIC-0.07□□□□□ -2.42
VCANP13611 RNU6-335P-201ENST00000364563 113 ntBASIC-0.07□□□□□ -2.42
VCANP13611 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC-0.07□□□□□ -2.42
VCANP13611 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC-0.07□□□□□ -2.42
VCANP13611 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC-0.07□□□□□ -2.42
VCANP13611 AC087685.1-201ENST00000587507 141 ntBASIC-0.07□□□□□ -2.42
VCANP13611 AC007038.2-201ENST00000608095 740 ntBASIC-0.07□□□□□ -2.42
VCANP13611 AL353149.1-201ENST00000610667 244 ntBASIC-0.07□□□□□ -2.42
VCANP13611 AC091304.9-201ENST00000612091 226 ntBASIC-0.07□□□□□ -2.42
VCANP13611 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.08□□□□□ -2.42
VCANP13611 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.08□□□□□ -2.42
VCANP13611 AL591034.1-201ENST00000407447 340 ntBASIC-0.08□□□□□ -2.42
VCANP13611 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC-0.08□□□□□ -2.42
VCANP13611 AL589880.1-201ENST00000448271 287 ntBASIC-0.08□□□□□ -2.42
VCANP13611 AC147055.4-201ENST00000504399 745 ntBASIC-0.08□□□□□ -2.42
VCANP13611 LY96-202ENST00000518893 430 ntTSL 3 BASIC-0.08□□□□□ -2.42
VCANP13611 MIR4458-201ENST00000578872 75 ntBASIC-0.08□□□□□ -2.42
VCANP13611 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC-0.08□□□□□ -2.42
VCANP13611 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.08□□□□□ -2.42
VCANP13611 AL356585.4-201ENST00000623078 1229 ntBASIC-0.08□□□□□ -2.42
VCANP13611 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC-0.08□□□□□ -2.42
VCANP13611 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC-0.08□□□□□ -2.42
VCANP13611 MIR518A1-201ENST00000385068 85 ntBASIC-0.08□□□□□ -2.42
VCANP13611 HMGB1P36-201ENST00000487709 576 ntBASIC-0.08□□□□□ -2.42
VCANP13611 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC-0.08□□□□□ -2.42
VCANP13611 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.08□□□□□ -2.42
VCANP13611 RNU1-124P-201ENST00000363861 145 ntBASIC-0.08□□□□□ -2.42
VCANP13611 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.08□□□□□ -2.42
VCANP13611 SNORA16.2-201ENST00000390991 127 ntBASIC-0.08□□□□□ -2.42
VCANP13611 RNU6-575P-201ENST00000411326 105 ntBASIC-0.08□□□□□ -2.42
VCANP13611 SNORA44.1-201ENST00000517031 108 ntBASIC-0.08□□□□□ -2.42
VCANP13611 IGJP1-201ENST00000522682 475 ntBASIC-0.08□□□□□ -2.42
VCANP13611 AC074051.3-201ENST00000570238 358 ntBASIC-0.08□□□□□ -2.42
VCANP13611 MIR4529-201ENST00000578110 78 ntBASIC-0.08□□□□□ -2.42
VCANP13611 MIR4716-201ENST00000579628 84 ntBASIC-0.08□□□□□ -2.42
VCANP13611 MIR3937-201ENST00000580135 106 ntBASIC-0.08□□□□□ -2.42
VCANP13611 RAC1P9-201ENST00000604990 392 ntBASIC-0.08□□□□□ -2.42
VCANP13611 AC098614.4-201ENST00000607601 462 ntBASIC-0.08□□□□□ -2.42
VCANP13611 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC-0.08□□□□□ -2.42
VCANP13611 SNORA25-201ENST00000384384 134 ntBASIC-0.09□□□□□ -2.42
VCANP13611 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.09□□□□□ -2.42
VCANP13611 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
VCANP13611 RPL21P103-201ENST00000479921 488 ntBASIC-0.09□□□□□ -2.42
VCANP13611 AC091874.1-201ENST00000511402 339 ntBASIC-0.09□□□□□ -2.42
VCANP13611 AC090142.3-201ENST00000519012 385 ntBASIC-0.09□□□□□ -2.42
VCANP13611 AC107953.1-201ENST00000522216 297 ntBASIC-0.09□□□□□ -2.42
VCANP13611 EIF1P4-201ENST00000572664 335 ntBASIC-0.09□□□□□ -2.42
VCANP13611 AC023934.1-201ENST00000574529 2389 ntBASIC-0.09□□□□□ -2.42
VCANP13611 AC106901.1-201ENST00000425086 698 ntBASIC-0.09□□□□□ -2.42
VCANP13611 snoU13.25-201ENST00000458945 104 ntBASIC-0.09□□□□□ -2.42
VCANP13611 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
VCANP13611 MIR3681-201ENST00000580089 72 ntBASIC-0.09□□□□□ -2.42
VCANP13611 NUTF2P8-201ENST00000604593 363 ntBASIC-0.09□□□□□ -2.42
VCANP13611 AL589935.2-201ENST00000616471 1231 ntBASIC-0.09□□□□□ -2.42
VCANP13611 RNU6-152P-201ENST00000384037 107 ntBASIC-0.1□□□□□ -2.43
VCANP13611 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC-0.1□□□□□ -2.43
VCANP13611 TRAPPC2P8-201ENST00000440676 396 ntBASIC-0.1□□□□□ -2.43
VCANP13611 RNU4-54P-201ENST00000516428 129 ntBASIC-0.1□□□□□ -2.43
VCANP13611 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
VCANP13611 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.1□□□□□ -2.43
VCANP13611 CENPUP2-201ENST00000555897 1186 ntBASIC-0.1□□□□□ -2.43
VCANP13611 FARSBP1-201ENST00000435808 1778 ntBASIC-0.1□□□□□ -2.43
VCANP13611 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.1□□□□□ -2.43
VCANP13611 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.1□□□□□ -2.43
VCANP13611 AC010409.1-201ENST00000487382 476 ntBASIC-0.1□□□□□ -2.43
VCANP13611 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.1□□□□□ -2.43
VCANP13611 SCARNA16.2-201ENST00000516520 172 ntBASIC-0.1□□□□□ -2.43
VCANP13611 AC023824.2-201ENST00000566185 400 ntBASIC-0.1□□□□□ -2.43
VCANP13611 SNORD14A-201ENST00000606526 91 ntBASIC-0.1□□□□□ -2.43
VCANP13611 SNORD44.1-201ENST00000363202 61 ntBASIC-0.11□□□□□ -2.43
VCANP13611 SNORA4.1-201ENST00000364263 144 ntBASIC-0.11□□□□□ -2.43
VCANP13611 RNU2-63P-201ENST00000410792 194 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AC093677.1-201ENST00000514414 678 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AC012414.6-201ENST00000568241 401 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.11□□□□□ -2.43
VCANP13611 TPTE2P4-201ENST00000258589 1605 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.11□□□□□ -2.43
VCANP13611 RNU6V-201ENST00000384105 107 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.11□□□□□ -2.43
VCANP13611 RAP1BP2-201ENST00000478270 544 ntBASIC-0.11□□□□□ -2.43
VCANP13611 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.11□□□□□ -2.43
VCANP13611 AC005668.1-201ENST00000571142 476 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AC091805.2-201ENST00000603848 235 ntBASIC-0.11□□□□□ -2.43
VCANP13611 RNA5SP128-201ENST00000365305 116 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.11□□□□□ -2.43
VCANP13611 COX6CP6-201ENST00000490840 228 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC-0.11□□□□□ -2.43
VCANP13611 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.11□□□□□ -2.43
VCANP13611 RNU2-12P-201ENST00000517216 168 ntBASIC-0.11□□□□□ -2.43
VCANP13611 AC091489.2-201ENST00000566263 604 ntBASIC-0.11□□□□□ -2.43
VCANP13611 MIR5571-201ENST00000577998 113 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms