Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 Z94722.1-201ENST00000604328 474 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AL031775.1-201ENST00000607014 887 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AC009090.3-201ENST00000616553 565 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AL158801.5-201ENST00000623123 465 ntBASIC2.38□□□□□ -2.03
TOP1P11387 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TOP1P11387 MTND4P1-201ENST00000457501 1466 ntBASIC2.38□□□□□ -2.03
TOP1P11387 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.38□□□□□ -2.03
TOP1P11387 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TOP1P11387 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TOP1P11387 HSPA8P4-201ENST00000511877 1920 ntBASIC2.37□□□□□ -2.03
TOP1P11387 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TOP1P11387 MT-TH-201ENST00000387441 69 ntBASIC2.37□□□□□ -2.03
TOP1P11387 SNORA26.8-201ENST00000391306 124 ntBASIC2.37□□□□□ -2.03
TOP1P11387 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.37□□□□□ -2.03
TOP1P11387 RNA5SP338-201ENST00000410495 85 ntBASIC2.37□□□□□ -2.03
TOP1P11387 MTCO1P17-201ENST00000411522 491 ntBASIC2.37□□□□□ -2.03
TOP1P11387 CYCSP46-201ENST00000423569 204 ntBASIC2.37□□□□□ -2.03
TOP1P11387 MTND1P28-201ENST00000435623 950 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.37□□□□□ -2.03
TOP1P11387 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.37□□□□□ -2.03
TOP1P11387 PAXBP1P1-201ENST00000449315 447 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TOP1P11387 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.37□□□□□ -2.03
TOP1P11387 MTND5P13-201ENST00000513046 1079 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 AC117532.1-201ENST00000514638 323 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.37□□□□□ -2.03
TOP1P11387 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.37□□□□□ -2.03
TOP1P11387 CYCSP26-201ENST00000534107 320 ntBASIC2.37□□□□□ -2.03
TOP1P11387 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.37□□□□□ -2.03
TOP1P11387 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.37□□□□□ -2.03
TOP1P11387 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
TOP1P11387 PCMTD1P2-201ENST00000565017 355 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 PIGPP4-201ENST00000584447 307 ntBASIC2.37□□□□□ -2.03
TOP1P11387 MIR4765-201ENST00000585007 77 ntBASIC2.37□□□□□ -2.03
TOP1P11387 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 AP001981.2-201ENST00000603241 418 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AL358072.1-201ENST00000604156 575 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AC105129.3-201ENST00000605455 485 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AC104010.1-201ENST00000616889 150 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AC012150.2-201ENST00000621300 544 ntBASIC2.37□□□□□ -2.03
TOP1P11387 AP003400.5-201ENST00000624827 617 ntBASIC2.37□□□□□ -2.03
TOP1P11387 PISRT1-201ENST00000626175 531 ntBASIC2.37□□□□□ -2.03
TOP1P11387 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TOP1P11387 MTND5P33-201ENST00000571250 1450 ntBASIC2.37□□□□□ -2.03
TOP1P11387 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
TOP1P11387 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
TOP1P11387 RNU6-501P-201ENST00000364072 100 ntBASIC2.36□□□□□ -2.03
TOP1P11387 RNA5SP160-201ENST00000364866 120 ntBASIC2.36□□□□□ -2.03
TOP1P11387 RNA5SP138-201ENST00000365098 114 ntBASIC2.36□□□□□ -2.03
TOP1P11387 MTCYBP36-201ENST00000404146 440 ntBASIC2.36□□□□□ -2.03
TOP1P11387 RPL17P12-201ENST00000413391 526 ntBASIC2.36□□□□□ -2.03
TOP1P11387 UBE2FP1-201ENST00000416536 447 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP1P11387 AC027124.2-201ENST00000428249 105 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC244035.1-201ENST00000430042 390 ntBASIC2.36□□□□□ -2.03
TOP1P11387 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.36□□□□□ -2.03
TOP1P11387 RPL37P21-201ENST00000435890 276 ntBASIC2.36□□□□□ -2.03
TOP1P11387 MTCO3P45-201ENST00000443036 613 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP1P11387 TAF9P1-201ENST00000445421 515 ntBASIC2.36□□□□□ -2.03
TOP1P11387 TAF9P2-201ENST00000454958 515 ntBASIC2.36□□□□□ -2.03
TOP1P11387 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP1P11387 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.36□□□□□ -2.03
TOP1P11387 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP1P11387 RNU7-193P-201ENST00000516723 65 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.36□□□□□ -2.03
TOP1P11387 AC068587.4-201ENST00000533893 186 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP1P11387 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.36□□□□□ -2.03
TOP1P11387 AC021739.1-201ENST00000559631 174 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP1P11387 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.36□□□□□ -2.03
TOP1P11387 AC105245.1-201ENST00000581934 244 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AL158827.2-201ENST00000602494 330 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC112187.2-201ENST00000604345 283 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC092354.1-201ENST00000606057 376 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AC080013.6-201ENST00000606185 215 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP1P11387 YWHAEP7-203ENST00000622054 312 ntBASIC2.36□□□□□ -2.03
TOP1P11387 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.36□□□□□ -2.03
TOP1P11387 AL691447.3-201ENST00000635020 330 ntBASIC2.36□□□□□ -2.03
TOP1P11387 RNU5F-6P-201ENST00000362979 116 ntBASIC2.35□□□□□ -2.03
TOP1P11387 RNU6-853P-201ENST00000364306 107 ntBASIC2.35□□□□□ -2.03
TOP1P11387 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.35□□□□□ -2.03
TOP1P11387 AC078974.1-201ENST00000411597 223 ntBASIC2.35□□□□□ -2.03
TOP1P11387 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.35□□□□□ -2.03
TOP1P11387 RPS27AP14-201ENST00000422868 454 ntBASIC2.35□□□□□ -2.03
TOP1P11387 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.35□□□□□ -2.03
TOP1P11387 RPL30P4-201ENST00000429309 333 ntBASIC2.35□□□□□ -2.03
TOP1P11387 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
TOP1P11387 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
TOP1P11387 MTND4P32-201ENST00000437189 1237 ntBASIC2.35□□□□□ -2.03
TOP1P11387 FABP5P14-201ENST00000437273 393 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms